Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00822 ATGGCGGCTACTccaccatcaccaccaatcgatccacctcccacgacgcttcctactcaaccaccaccaccaATGCTCGTCTCTGATTCATTCGCAAAAGATGCTATTCTCGCCTGGTTTCGCGGCGAGTTTGCCGCTGCTAATGCAATCATCGATGCTCTCTGTACTCATCTCTCTCAACTTTCGTCCGCCGCGGATTATAGCTCTGTATTCGCCGCTATTCATCGCCGGAGACTCCATTGGATCCCTGTTCTTCAGATGCAGAAGTATCACTCCATTGCTGATGTCGCGCTTCAGCTTCGAAAAGTTGATGAGAATAAAAATATCGTTGAGGAGGTTCGTGAAAACGACGTCGTTGTAGAGGAGGAACGGAAAACAGAGGCGAAAGTTATCGAGGCTGGTGATGAACATGAAGAATATGATTCCCCCGAGAGTGAGATTACTGATTCAGGATCTCAAGAAAACCAGGATAATTCGATGAACATTGATATATGTTCCAATCATGAAGAGTGTTTTTCAGCAAAGGAGTCAGTGAAGGGGCATATGGTGAATGTTGTGAAAGGATTGAAGTTATACGAGGACATTTTCACTGATTCAGAATTATGCAAGCTGTCCGATTTTGTGAATGAGATCCATACTGCTGGTCAGAATGGGGATCTGTCAGGTGAAACTTTTATATTGTTCAACAAACAGATGAAGGGTAACAAGAGAGAGCTGATTCAGCTGGGTGTCCCAATATTTGGACAGATAAAGGAGGACACAAAAAATAATATAGAGCCAATTCCAGGACTTCTGCAACGTGTCATTGATCACCTTATTCAATGGCAATTACTTCCAGAGTACAAAAGACCAAATGGTTGTATCATCAACTTTTTCGAAGAGGGGGAGTTTTCTCAGCCATTCCTGAAACCACCGCATCTGGATCAACCTGTGTCCACTCTTCTTCTATCTGAATCAACCATGGCTTTTGGGCGTATCCTCATGAGTGAAAATGATGGGAACTACAAGGGACCACTAATGCTCTCATTGAAGAAGGGGTCTCTTGTAGTGATGAGAGGAAACAGTGCTGACATGGCAAGGCATGTCATGTGTCCATCTCCTAACAGAAGGGTGAGCATCACCTTCTTTAGAGTGAGGCCAGACTCCAATCAATGCCAATCACCAACTCCTACCATGACAAGTGAAATGACTCTGTGGCAACCTGCCATTGCTAATCCTTATGCTTTGCCAAATGGAGTTCTAAGTGGCTATGAGGGTATGGACATGATGCCCAAATGGGGAATGCTTCGCGGGCCAATGATGATGCTGACCCCTATGCGTCCTATGGCGTTGAATCCCCGCAAACTTGCTGGTGGTGGTACTGGAGTCTTCTTGCCATGGAATGTCCCATCCAGAAAACCTGCAAAGCATCTTCCACCACGTGCACAAAAAGGAAGGCTTCTAGCATTGCCTTCTCCTGTTGAACCACACATTGGAGAGTCCACTTCTGAACCCAGCATTTGTGTTGAAGGATGA 1515 0.4343 MAATPPSPPIDPPPTTLPTQPPPPMLVSDSFAKDAILAWFRGEFAAANAIIDALCTHLSQLSSAADYSSVFAAIHRRRLHWIPVLQMQKYHSIADVALQLRKVDENKNIVEEVRENDVVVEEERKTEAKVIEAGDEHEEYDSPESEITDSGSQENQDNSMNIDICSNHEECFSAKESVKGHMVNVVKGLKLYEDIFTDSELCKLSDFVNEIHTAGQNGDLSGETFILFNKQMKGNKRELIQLGVPIFGQIKEDTKNNIEPIPGLLQRVIDHLIQWQLLPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPVSTLLLSESTMAFGRILMSENDGNYKGPLMLSLKKGSLVVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCQSPTPTMTSEMTLWQPAIANPYALPNGVLSGYEGMDMMPKWGMLRGPMMMLTPMRPMALNPRKLAGGGTGVFLPWNVPSRKPAKHLPPRAQKGRLLALPSPVEPHIGESTSEPSICVEG 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00822 504 MobiDBLite consensus disorder prediction 1 24 - -
Car04g00822 504 MobiDBLite consensus disorder prediction 485 504 - -
Car04g00822 504 Gene3D - 171 387 IPR037151 -
Car04g00822 504 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 283 380 IPR005123 -
Car04g00822 504 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 19 502 IPR044842 GO:0003729|GO:0006402|GO:0032451
Car04g00822 504 SUPERFAMILY Clavaminate synthase-like 179 379 - -
Car04g00822 504 MobiDBLite consensus disorder prediction 134 159 - -
Car04g00822 504 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 19 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00822 Car-Chr4 8141248 8145982 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00822 K10767 - gmx:100791586 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00822 04 8141248 8145982 Car04g00822 04 8141248 8145982 ECH
Car03g02217 03 68209588 68215738 Car04g00822 04 8141248 8145982 PCT