Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00810 ATGGCGAAGCGttcttctattcttctctttttcttctgcttGATACAAACACACGCCATTCTAGACCCAACTGATTTCCTAGCTCTGCAATCAATACGCAAGTCTCTTGAAGACATGCCTGGTTCTGATTTCTTTTCTTCTTGGGATTTCACTGCTGATCCTTGTAACTTCTCCGGCGTTTACTGCGACTCCGATAAGGTTATTGCTCTTAATCTCGGCGATCCTAGAGCCGGTTCAGCTGGTTTAACAGGACGACTTGACACGGCCATCGGTAAACTATCTGCTCTCGCGGAGTTTACCGTTGTTCCAGGAAGGATATATGGTCCTATGCCTCAAACCATTTCCAATTTGAAGAACCTCAAGTTTCTAGGCGTTAACAGAAACTTCATCTCCGGCGACATTCCGGCGGGGTTAGGTGAGTTACGCAGTCTCAGAACTATCGATCTCAGTTACAATCAGCTGACCGGAAACATTCCTCCGACGGTGGGATCATTACCGGGGTTAACGAACCTGATACTCTGTCACAACCGTCTCTCCGGTTCTATTCCCCGGTTTGATTCTCAAATCCTGAGCCGGTTAGACCTAAAGCACAACTCTCTGACCGGTTCGATCGCTCCAAACTCTCTCCCTCCGTCTCTTCAGTATCTGTCATTGTCGTGGAACCAACTTACTGGGTCGATGGACCGGGTATTGAGCCGGCTGGAGCAGTTAAACTATTTGGACCTTAGTCTGAACCAGTTCACGGGAACCCTCCCAGGTAGGATCTTCTCATTTCCTTTAACCAATCTCCAATTAGAAAGAAACCAGTTCTCCGGTTCAGTGGAACCGGTGGATCAAGTCGCAATCCCAACCGTTGATCTGAGTTACAACAGGTTATCCGGTCAAATATCGCCTATGCTAGCTAGCGTGCAGAATCTGTACTTAAACAACAACCGGTTCACGGGTCGGGTACCGGCTAGTTTCGTGGATCGGTTATTGGACGCAAGCATACAGATATTATATTTGCAGCATAATTATCTAACGGGAATTGAGATTAGTCCAACGGCTGTGATTCCAGAGAGAAGCTCACTATGTATGCAGTATAATTGTATGGTCCCTCCCGTAGAGACTCCATGCCCATTGAGGTCTGGGAAGCAGAAAACAAGGCCTACTACACAGTGCAATCAGTTGAAGAGTTGA 1179 0.4631 MAKRSSILLFFFCLIQTHAILDPTDFLALQSIRKSLEDMPGSDFFSSWDFTADPCNFSGVYCDSDKVIALNLGDPRAGSAGLTGRLDTAIGKLSALAEFTVVPGRIYGPMPQTISNLKNLKFLGVNRNFISGDIPAGLGELRSLRTIDLSYNQLTGNIPPTVGSLPGLTNLILCHNRLSGSIPRFDSQILSRLDLKHNSLTGSIAPNSLPPSLQYLSLSWNQLTGSMDRVLSRLEQLNYLDLSLNQFTGTLPGRIFSFPLTNLQLERNQFSGSVEPVDQVAIPTVDLSYNRLSGQISPMLASVQNLYLNNNRFTGRVPASFVDRLLDASIQILYLQHNYLTGIEISPTAVIPERSSLCMQYNCMVPPVETPCPLRSGKQKTRPTTQCNQLKS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00810 392 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Car04g00810 392 Pfam Leucine Rich Repeat 143 164 IPR001611 GO:0005515
Car04g00810 392 PANTHER LRR RECEPTOR-LIKE KINASE 7 389 - -
Car04g00810 392 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 7 389 - -
Car04g00810 392 SUPERFAMILY L domain-like 34 365 - -
Car04g00810 392 Pfam Leucine Rich repeat 211 225 IPR001611 GO:0005515
Car04g00810 392 Gene3D Ribonuclease Inhibitor 188 364 IPR032675 -
Car04g00810 392 SMART LRR_typ_2 234 258 IPR003591 -
Car04g00810 392 SMART LRR_typ_2 141 165 IPR003591 -
Car04g00810 392 SMART LRR_typ_2 300 323 IPR003591 -
Car04g00810 392 SMART LRR_typ_2 211 233 IPR003591 -
Car04g00810 392 Gene3D Ribonuclease Inhibitor 24 187 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00810 Car-Chr4 8018493 8020067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00810 28 342 Receptor kinase-like Gene Family AT5G62230 32.110 1.09e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00810 - - gmx:100800224 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00810 04 8018493 8020067 Car04g00810 04 8018493 8020067 ECH
Car03g02209 03 68174189 68175943 Car04g00810 04 8018493 8020067 PCT