Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00793 ATGGAGAAAGTGATGAGGTTGGCAACAGAAAAGGGTGTGGTGATATTCACGAAGAGCTCATGTTGTATGTGTTATGCAGTGAACATTTTGTTTCGAGAACTAGGAGTGTTCCCAGTGGTTCATGAAATTGACAAAGATCCTGAAGGGAAAGAAATGGAGAAAGCTATAACAAAGTTGGGTTGTAATGCACCTGTCCCTGCAGTCTTCATTGGAGGAAAGCTTGTGGGCTCCACCAATGAAGTTATGTCCCTACACCTAAGTGGTTCACTCACTCCACTAATCAGGCCATTTCGACTTTAA 300 0.43 MEKVMRLATEKGVVIFTKSSCCMCYAVNILFRELGVFPVVHEIDKDPEGKEMEKAITKLGCNAPVPAVFIGGKLVGSTNEVMSLHLSGSLTPLIRPFRL 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00793 99 CDD GRX_GRXh_1_2_like 13 93 - -
Car04g00793 99 ProSiteProfiles Glutaredoxin domain profile. 1 99 - -
Car04g00793 99 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 96 IPR011905 -
Car04g00793 99 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Car04g00793 99 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Car04g00793 99 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Car04g00793 99 Pfam Glutaredoxin 13 75 IPR002109 -
Car04g00793 99 SUPERFAMILY Thioredoxin-like 1 96 IPR036249 -
Car04g00793 99 PANTHER GLUTAREDOXIN 1 99 IPR011905 -
Car04g00793 99 Gene3D Glutaredoxin 1 98 - -
Car04g00793 99 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00793 Car-Chr4 7852528 7853140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00793 1 95 Miscellaneous Gene Families AT4G15670 51.579 4.43e-35 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00793 K03676 - gmx:100500442 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00793 04 7852528 7853140 Car04g00793 04 7852528 7853140 ECH
Car03g02738 03 72968105 72968922 Car04g00793 04 7852528 7853140 PCT
Car04g00793 04 7852528 7853140 Car03g02739 03 72971064 72971934 PCT