Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00792 ATGGATAGAGTGAAGGATTTGGCATCAAAGAAAGCTGCAGTTATATTCACAAAGAGTTCATGCTACATGTGTCACAGCATAACACAACTTTTTTATGAGCTTGGAGCAAGCCCTGCAGTGCATGAGCTTGACAATGATGTCTATGGTAGGGAAATGGAAAGGGCTTTGAGGAGTCTTGGATGTAACCCTTCAGTTCCAGCTGTCTTCATTGGAGGAAAATTTGTAGGCTCATCAAAGGATGTTATATCTCTTCATGTTGATGGATCTCTCAAACAAATGCTTATGGCTGCTAGAGCCATTTGGTTCTAG 309 0.4142 MDRVKDLASKKAAVIFTKSSCYMCHSITQLFYELGASPAVHELDNDVYGREMERALRSLGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQMLMAARAIWF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00792 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Car04g00792 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Car04g00792 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Car04g00792 102 Gene3D Glutaredoxin 1 100 - -
Car04g00792 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Car04g00792 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Car04g00792 102 Pfam Glutaredoxin 14 75 IPR002109 -
Car04g00792 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
Car04g00792 102 CDD GRX_GRXh_1_2_like 12 93 - -
Car04g00792 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Car04g00792 102 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00792 Car-Chr4 7843832 7844646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00792 1 102 Miscellaneous Gene Families AT4G15690 48.039 4.86e-34 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00792 K03676 - gmx:100305876 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00792 04 7843832 7844646 Car04g00792 04 7843832 7844646 ECH
Car03g02739 03 72971064 72971934 Car04g00792 04 7843832 7844646 PCT
Car04g00792 04 7843832 7844646 Car03g02741 03 72982620 72983159 PCT