Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00791 ATGGATATATTAGCAGCATTGACAGCTGATAAGCCAGTGGTGATATTCAGCAAGAGCAGTTGTTGCATGGGGCATTCTGTGAAGGCTCTGATAAGCAGCTTTGGTGCCAAAATAACAGTTATTGAGGTGGACAAAATGGTAAATTGTGAGCAAATAGAGAGGGCACTGATTCAGCTTGGTTGTAGACCAAGTGTGCCAGCAGTGTTTATTGGACAACAATTTATAGGTGGTGTTGATCAAGTTATAAGACTAAATGTCCAAAACAAGCTTGCTCCATTGCTTTTAAGTGCTAAAGCTATTTTTATTTGGGGTCCAATAGATAAATAG 327 0.3945 MDILAALTADKPVVIFSKSSCCMGHSVKALISSFGAKITVIEVDKMVNCEQIERALIQLGCRPSVPAVFIGQQFIGGVDQVIRLNVQNKLAPLLLSAKAIFIWGPIDK 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00791 108 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Car04g00791 108 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 103 - -
Car04g00791 108 Gene3D Glutaredoxin 3 102 - -
Car04g00791 108 TIGRFAM GlrX-like_plant: glutaredoxin-like family 6 101 IPR011905 -
Car04g00791 108 CDD GRX_GRXh_1_2_like 12 93 - -
Car04g00791 108 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Car04g00791 108 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Car04g00791 108 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Car04g00791 108 Pfam Glutaredoxin 13 75 IPR002109 -
Car04g00791 108 PANTHER GLUTAREDOXIN 1 103 IPR011905 -
Car04g00791 108 SUPERFAMILY Thioredoxin-like 2 99 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00791 Car-Chr4 7827017 7827343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00791 1 102 Miscellaneous Gene Families AT4G15690 46.078 2.37e-30 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00791 K03676 - gmx:100803979 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00791 04 7827017 7827343 Car04g00791 04 7827017 7827343 ECH
Car03g02741 03 72982620 72983159 Car04g00791 04 7827017 7827343 PCT
Car04g00791 04 7827017 7827343 Car03g02742 03 72987264 72987581 PCT