Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00727 ATGGCCGTCACCACTACCTTTCTCAGCGCTACAGAAAAAAAACACTGGTGGCTCACAAACCGTAAGATTGCTGAGAAATACATCAAAGACGCTCGTAGCCTGATAGCAACACAAGAACGCAACGAGATTGTTTCAGCTCTGAGTCTTCTAGACGCTGCTCTTGCAATCTCACCACGTTTAGACCAAGCCCTTGAACTTAAAGCGAGGTCTTTACTCTATTTAAGAAGATTCAAAGATGTAGCAACTATGCTTCAAGATTACATTCCAAGTCTAAAAATTGCAAACGAAGATTCATTAAGCTCCGTTTCTTCAGATAGTTCATCTCAACATCTTTCAAGAGAAGGCGTTAAGTTACTTTCTTCGTCGGATTCCTCTGTTCAAGATCAGAGTTTTAAGTGCTTCTCTGTCTCTGATTTAAAGAAAAGAGTTATGGCTGGTCTCTCTAAAAGTTGTGATAATGAAGGTTATTGGAGATATTTGGTTTTGGGGAAAGCATGTTGCCACTTAGGTTTAATGGAAGACGCAATGGTTCTTCTCCAAACGGGAAAACGACTTGCAAGCGCTGCGTTTCGACGCGAAAGTGTTTGTTGGACAGACGACAGTTTCTCTTTATGGAAAACACCTTTCTCCGGCGACGATGTTTCAAAACCACCGGGAACCACTCCACCGAAAAGCCCTCTCTCAGAATCCGAAACCGTTAACCAACTTCTCGCACACATAAAATTCCTCCTCCGTCGACGCACCGCCGCAATCGCCGCCATGGACGCCGGACTCCACACAGAAGCAATCCGTCACTTCTCGAAAATCGTCGACGGGCGCCGTGCCGCTCCGCAAGGATTTCTCGCTGAATGTAGAATCGCTGATTCAATTGCCGATTGTAATAGAACACTTTCACTGGACCCTACTTGCATCCAAGCTCTTGAAGCTAGAGCCTCAATTTTAGAAACAATTCGTTGCTACCAAGATTCTCTTCATGATCTCGAACACTTAAAGCTTCTATACAACACAATTCTTCGAGATCGTAAACTAGCTGGTCCTCTATGGAAGCGTCACAATGTTCGTTATAATGAAATTCCTGGGAAACTATGCACTCTTACAGCGAAAATTCAACAACTGAAACAGAAAATGGCGAATGGTGAAACGAAGAATGTTGATTACTATGCTTTGATTGGGTTGAGACGTGGTTGTGGTAAATCAGAATTGCAACGGGCTCATCTTTTGCTTTGTTTGAAACATAAACCAGAGAAAACCACGTGCTTCATCGAACGGTGTGAATTTGGTGATGAACGTGATATTGAGTTAGTTAAAGATAGAGCGAGGATGTCTGCTATGTTGTTGTATAGGTTGCTTCAGAAAGGTTATTCAAATGTTATGAATTGTATTGTGGAAGAAGAGACTGCTGAGAAACAGAGGAAGATGAATTTACAATTGCAACAACAACAACAAAAAAGTGTTGCAAATGGACATGTTAGTGTtaataataacaataacaataacaaCACTCGTTCGGTTGTTGTTGTTCAAGTGCAACAGAATGCAAGAGATGAAAAAAGTAAGAAGAAATTGGATGAATTGGAAATGGGAGATAAGTTTGCTATGTCTTCACCAAGCATTGCGAATCCAACGGTGTTTCAAGGGGTGTTTTGCCGTGATCTAACGGTGGTAGGGAACTTGCTTTCGCAAAGGTTTAGTAATAGGTCAATTCCAGTCAAGTACGAGGGGCTTAGTTGCTAA 1734 0.417 MAVTTTFLSATEKKHWWLTNRKIAEKYIKDARSLIATQERNEIVSALSLLDAALAISPRLDQALELKARSLLYLRRFKDVATMLQDYIPSLKIANEDSLSSVSSDSSSQHLSREGVKLLSSSDSSVQDQSFKCFSVSDLKKRVMAGLSKSCDNEGYWRYLVLGKACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWTDDSFSLWKTPFSGDDVSKPPGTTPPKSPLSESETVNQLLAHIKFLLRRRTAAIAAMDAGLHTEAIRHFSKIVDGRRAAPQGFLAECRIADSIADCNRTLSLDPTCIQALEARASILETIRCYQDSLHDLEHLKLLYNTILRDRKLAGPLWKRHNVRYNEIPGKLCTLTAKIQQLKQKMANGETKNVDYYALIGLRRGCGKSELQRAHLLLCLKHKPEKTTCFIERCEFGDERDIELVKDRARMSAMLLYRLLQKGYSNVMNCIVEEETAEKQRKMNLQLQQQQQKSVANGHVSVNNNNNNNNTRSVVVVQVQQNARDEKSKKKLDELEMGDKFAMSSPSIANPTVFQGVFCRDLTVVGNLLSQRFSNRSIPVKYEGLSC 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00727 577 SUPERFAMILY TPR-like 249 331 IPR011990 GO:0005515
Car04g00727 577 PANTHER - 1 577 - -
Car04g00727 577 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 577 - -
Car04g00727 577 CDD DnaJ 385 416 IPR001623 -
Car04g00727 577 Gene3D Tetratricopeptide repeat domain 10 485 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00727 Car-Chr4 7152175 7154536 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00727 - - gmx:100800231 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00727 04 7152175 7154536 Car04g00727 04 7152175 7154536 ECH
Car03g02803 03 73465830 73469511 Car04g00727 04 7152175 7154536 PCT