Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00617 ATGTCTCTGATAACCGAGGAGATCAAAGCCAAATCAGAGGTATACCATGGAGATGAAATATGCCAAGTGAAGTCCAAGGAACTTCTTAAGGAAATAAGCCTACCCAATGGCCTTTTGCCTTTGAAAGAGATTGAAGAATGTGGTTATCATAGGGAGAGTGGGTTTGTGTGGCTTAAACAGAAGAAAAGCCGTACACACAAGTTTGAGAAAATTGGGAAGCTTGTGAGTTATGGTACTGAAGTCACTGCCACTGTTGAGGTTGGTAAGATCAAGAAGCTAACTGGTGTGAAGGTGAAGGAGCTGTTGGTTTGGCTTTCATTGAGCGATATCTATGCAGATAATCCACCCACTGACAAAATCACGTTCAAGACCCCTGCTGGGCTTTTCAGGACATTCCCTGTCTCAGCTTTTGAAATAGAAGAAGTTAAGGATGTGAAGGAAGAAAACAAAGATCAAGTCAAAGAAGCAGCACCTGCTGCTACTGCTACTGTTGAAGTCAAAGAGGTCGAGAACAATGCAAAGCAGCTATAA 531 0.4256 MSLITEEIKAKSEVYHGDEICQVKSKELLKEISLPNGLLPLKEIEECGYHRESGFVWLKQKKSRTHKFEKIGKLVSYGTEVTATVEVGKIKKLTGVKVKELLVWLSLSDIYADNPPTDKITFKTPAGLFRTFPVSAFEIEEVKDVKEENKDQVKEAAPAATATVEVKEVENNAKQL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00617 176 Gene3D - 4 148 IPR036758 -
Car04g00617 176 PANTHER PLANT/F25P12-18 PROTEIN 2 161 - -
Car04g00617 176 SUPERFAMILY At5g01610-like 3 142 IPR036758 -
Car04g00617 176 PANTHER T31J12.3 PROTEIN-RELATED 2 161 IPR007493 -
Car04g00617 176 Coils Coil 159 176 - -
Car04g00617 176 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00617 Car-Chr4 6134380 6135125 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00617 - - gmx:100500427 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02906 03 74317191 74317923 Car04g00617 04 6134380 6135125 PCT