Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00447 ATGGATGTTTCCTATTTCACCACAATCTTTTTCATCACTTTCACTTTCTTGCTCTTCCTACCTTCTTCCAAACCAATTTCCAATTACAACACATTACTAGTATACAAAACATGTTCAACACAAACCTTTAACCATCAATCTTACTCTTCTCAAACACCACTCAATTCATTATTCCAACAACTCATAGCACAATCATCCCAATACAAATTCTTCAAAACCAACGAAGCAATCAACAACGACACCTTCATCTCTGGCTTTTTTCAATGCAGACACGACATCACCATACAAGATTGTTTCACATGTGTAACAACTTTACTTTCAAACACCTTGTGCAGTGATTCCACATCAGCACGAGTACAACTCCAAGGTTGCTATGTTCAATATAAAACAGAACAACAACAACAATTTCAAGAAACAACTATTCCTGAATCGAAAAATAACATTATTTTTCACAAGGATTGTGGAGTACCCTTTGTAGAGTTAAAAGAGTTGATGGATGAGGCATTTATGAGATTGGAAAATGGGATTATAAATAGTGATGGGTTTTGCACGATGAATTATAAAAGGGTGAAATTGATGGCACAGtgtgaaggtgatttgaatagatgtgaatgtagtgaatgtgTTGGTGATGCAGTTGAGGTTGCTAAGGAAGAATGTGATAGTTCAGTTTCGGCACAAATATATTTTGATAAGTGTTTTATAAGCTATGAATACATGCCGAAATCAAATGGTGATGCTGGTTACTCTGTTCCAGGGGAAAGCAGAAACAGCAACACCCAAAAGTTGATAGCAATAATTGTTGGAGGAGCTGCCGCTCTGTTACTTGGTCTTATTTTTGTATCGCTGCTTAACTCTAGGCTTAAAAAAGACGATTATGAGTAG 885 0.3469 MDVSYFTTIFFITFTFLLFLPSSKPISNYNTLLVYKTCSTQTFNHQSYSSQTPLNSLFQQLIAQSSQYKFFKTNEAINNDTFISGFFQCRHDITIQDCFTCVTTLLSNTLCSDSTSARVQLQGCYVQYKTEQQQQFQETTIPESKNNIIFHKDCGVPFVELKELMDEAFMRLENGIINSDGFCTMNYKRVKLMAQCEGDLNRCECSECVGDAVEVAKEECDSSVSAQIYFDKCFISYEYMPKSNGDAGYSVPGESRNSNTQKLIAIIVGGAAALLLGLIFVSLLNSRLKKDDYE 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00447 294 ProSiteProfiles Gnk2-homologous domain profile. 143 242 IPR002902 -
Car04g00447 294 Gene3D - 30 132 IPR038408 -
Car04g00447 294 Gene3D - 161 241 IPR038408 -
Car04g00447 294 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 5 293 - -
Car04g00447 294 Pfam Salt stress response/antifungal 186 238 IPR002902 -
Car04g00447 294 Pfam Salt stress response/antifungal 38 130 IPR002902 -
Car04g00447 294 ProSiteProfiles Gnk2-homologous domain profile. 31 133 IPR002902 -
Car04g00447 294 PANTHER PLASMODESMATA-LOCATED PROTEIN 4 5 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00447 Car-Chr4 4609088 4611389 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00447 4 294 Receptor kinase-like Gene Family AT5G40380 24.172 5.08e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00447 - - gmx:100795973 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02357 03 69494752 69496616 Car04g00447 04 4609088 4611389 PCT