Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00177 ATGAGAGATGACAACTCCAAGAAAAGCAAGCTTTCATGGCCCAAAACTTTGGTCAAAAAATGGTTCAATATTAAGAGTAAAGCTGAAGACTTTCAAGCAGATGATGATGTTCTTTATGGAGGTGTTGATGAAGAGTGGATGAACAACTGTTCACAAAGGGAGGAATGCACTATCAAGAAAAGCAAAACAGAAAGAGTAAAGAGAAGGCACACAGAAAGAATGCGACGATGTAAGATTGATCACGATGTAGCTCAGGTTACTGATGTGCATAACTATAGAATCTTTGTTGCTACTTGGAATGTAGCTGGAAGATCTCCTCCAAGTTATTTAAATCTGGAAGATTGGCTTCACACTTCTCCTCCTGCTGATATTTATGTTCTTGGGTTTCAAGAAATTGTGCCTCTCAATGCTGGAAATGTTTTGGGGACAGAAGACAATGGTCCTGCTAGAAAATGGCTAGCTCTTATTAGAAAGACACTTAACAGTCTTCCCGGAACGAGTGGCGAATGCCACACTAATTCACCTCTCCCTGATCCCATTGTCGAGTTAGAGGCTGATTTTGAGGGATCAATGAGGCAGAAAGCTACCTCTTTCTTCCATCGCAGGTCGTTCCAATCTTTAAGTCATAGTATGAGAGTGGACAATGACATGTCAGCACCACAAGCATGCCTTGATCGCCGTTTCAGCGTATGTGATAGAATGATATTTGGTCACAGCACAGGTGACTATGATTCCAATTATAGATGGGCGTCATCGGATGATGAAAATGGAGACTCTCCGGTTACAGCGCAGTATTCGCCAATGTCATATAGAGGGTGTGTCTCTATGGAGGACAGAGATAGACAGACAGAGAACTCAAGATATTGTTTGGTAGCTAGTAAGCAAATGGTTGGGATCTTTCTAACAGTTTGGGTGAAAAGCAATATAAGAGACGATGTTCGCAACATGAAAGTGTCTTGCGTTGGCAGAGGGTTGATGGGATATCTTGGAAACAAGGGTTCAATATCAATTAGCATGTCCTTGCACAAAACAAGCTTTTGCTTCATCTGTAGTCATTTGACTTCTGGACAAAAAGAGGGTGATGAGCTACGGAGAAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCCCGAGTTAACGGCATTGCCGATGAGAGTTCTCCTCAGACTATCCTGGATCATGATCGAATAATTTGGCTGGGGGATTTAAACTATCGGATAGCCCTTACTTACCGTGCAGCAAAAGCTCTCGTAGAGATGCATAATTGGAAGGTATTGTTAGAGAATGACCAGCTACATATAGAGCAGGAACAAGGTCGTGTCTTTGAAGGATGGAATGAGGGCCAAATATACTTCCCTCCCACATACAAGTATTCAAACAATTCGGACAGATACGCAGGCGATGAAAGGCACTCGAAACAAAAGAGGAGAACTCCAGCATGGTGTGATCGGATCTTATGGTATGGAAGAGGCCTCCGCCAATTATCTTATGTTCGCGGGGAGTCAAGATTCTCCGATCATAGACCAGTTTGTAGCGTGTTCCTGGCAGAAGTTGAGTCTATTAGCCGAAACCGAATCAGAAAATGTTCTAGTTGTTCAAAAACTGATGTACAAAATGTAACATACAAGGTGGGCACTGCTCTGAGGAGGAATGCTAGCCCCAATACTTCTTTGATCAATGCAAATAACATCTCAATTCTCATTAAAAAAGAAACATAA 1725 0.4209 MRDDNSKKSKLSWPKTLVKKWFNIKSKAEDFQADDDVLYGGVDEEWMNNCSQREECTIKKSKTERVKRRHTERMRRCKIDHDVAQVTDVHNYRIFVATWNVAGRSPPSYLNLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTSGECHTNSPLPDPIVELEADFEGSMRQKATSFFHRRSFQSLSHSMRVDNDMSAPQACLDRRFSVCDRMIFGHSTGDYDSNYRWASSDDENGDSPVTAQYSPMSYRGCVSMEDRDRQTENSRYCLVASKQMVGIFLTVWVKSNIRDDVRNMKVSCVGRGLMGYLGNKGSISISMSLHKTSFCFICSHLTSGQKEGDELRRNSDVMEILRKTRFPRVNGIADESSPQTILDHDRIIWLGDLNYRIALTYRAAKALVEMHNWKVLLENDQLHIEQEQGRVFEGWNEGQIYFPPTYKYSNNSDRYAGDERHSKQKRRTPAWCDRILWYGRGLRQLSYVRGESRFSDHRPVCSVFLAEVESISRNRIRKCSSCSKTDVQNVTYKVGTALRRNASPNTSLINANNISILIKKET 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00177 574 SMART i5p_5 226 524 IPR000300 GO:0016791|GO:0046856
Car04g00177 574 SUPERFAMILY DNase I-like 82 531 IPR036691 -
Car04g00177 574 Pfam Endonuclease/Exonuclease/phosphatase family 97 509 IPR005135 GO:0003824
Car04g00177 574 Gene3D Endonuclease/exonuclease/phosphatase 70 216 IPR036691 -
Car04g00177 574 Gene3D Endonuclease/exonuclease/phosphatase 225 547 IPR036691 -
Car04g00177 574 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 542 - -
Car04g00177 574 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 542 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00177 Car-Chr4 1843185 1847158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00177 284 566 Acyl Lipid Metabolism Gene Families AT1G65580 28.173 4.09e-31 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00177 - - gmx:100788764 987.638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00177 04 1843185 1847158 Car04g00177 04 1843185 1847158 ECH
Car03g02267 03 68651204 68655368 Car04g00177 04 1843185 1847158 PCT