Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00148 atgTCGACGCGCCTTAGCACGAGTTTGTGTGACCATCTTCAACGCGAAAGAGAAGACAAGATAAATACTCTGCTAATTCGTCTGCGCCAGAGGACCTTTATCCTCTCTCTGCTATCTCTCTCCGTTATCGCTCCTCTCATTTTCCTCGGAAGAAGAGAGTTCCTTGAAGATTTGTATCGTGTTACATACCAGACAGATACTTTGAAGTTAAATTCTGTAGAACAGATTCGAGAAGGTGCTGGAGAATTAGAAGAGCCAAATCAAGTTGTTTATAAACAAAAAGATGTTGTTTCAACTATTAATTACAGTTCAATCAAGAATAATGATTCTGAGGAATCTAGAATTGCAGCATTGGAAATAAATGTTTCAGGAGTCAACCATGATGAAAGACAAGACCAGGATGCTCAGAAAGAAGATTTATCCTCCATACATGAAGATACAAATGTACACGCTGTTCCACATAAAACGTCGAAGGAGAATATTAAAGTGACCAATAGGCCATCAGGTCGAATAGCAGACGGTCATCATATTTTAAACTCTCCCTCTAATGAAGGGAAAAGTCAGAAGGTTGAAGAGATTAAGGATCAAATTTTAATGGCTAAAGTATACTTGAAGTTTGCACCACCAAGCAGCAACTCACGCTTGAAGCGGCTGGAGCTGCAAATGAAAGAGATGGAGCGAGCAGTAGAAGGAGCCACCCGGGATTTAGATTTGTCAAGGAGTGTTTTGCAGAAAATGAGACACATGGAGGCCTCACTATCAAGTGTCGGTCGTGCTTTCTCAGACTGTTCTATGGTTGCTAAGCTTCAAGCAGTGAAGCACAAAACTGAAGAGCAAGTTCGTTTTCAGAGAAGGCAAGCAACATATCTTGTTCAACTTGCTGTAAGGACTGCCCCAAAAGGCTTTCACTGTCTTTCCATGCGGCTGACTGCTGAATATTTTGCCCTGAGGCCGGAGGAGAGAAAGCTTCCAAATGAAAATATGATTCATCATCCAGAACTTTATCATTATGCTGTCTTCTCTGACAATGTTTTGGCATGTGCGGTCGTTGTTAACTCTACTGTGTCTACTGCCAAGGAACCAGAGAAACTTGTTTTCCATATAGTGACCAATTCACTCTACTTGCCAGCAATCTCAATGTGGTTCTTAATAAACTCTCCCGGCAAAGCGACAGTCCATATACAGAATATAGACAATTTTGAATGGTTGTCGAAATACAATCCCTTTGGTAAAATTAATAACGGCGATCCAGGATACACTTCTGAATTGAACTACTTGCTTTTCTATCTGCCAGACATTTTCCCTGCCCTAAATAAGATTGTGATCTTTGATCATGATGTTGTGGTTCAACAAGATCTCAGTGGACTATGGAATGCCAATATGAAGGAAAATGTTATAGGAGCAGTTGGAACTTGTCAGGAAGGCAAAACCCCATTTCATAGGATTGATACGTTCATAAACTTCTCAGATCCATTAATTGGAGAGAGTTTTGATGTCAATACTTGCACATGGGCATTTGGGATGAATTTGTTTGATTTGCAACAATGGAGGAGACATAATTTAACTGCCGCGTATCACAAATATTTGCAAATGGGTTCGAAGAAGCCATTGTGGAATTGGAACTTTAGACGTCTGCCTTTAGGTTGGCTCACCTTCTATAACAAGACAGAGTTGTTGGACAGACGATGGCACATTCTTGGCCTTGGTCATAACTCAGGAGTCGATCGAAATGAGATTGAGCAGGCTGCCGTTATACACTTCGATGGGATTAGGAAGCCATGGCTAGATATTGCAATGGGCAGATATAAAAGTTATTGGACCAAATTTTTGGATTTTGACCACCCTTTTCTGCAACAGTGCAATCTCCAGGCGTAG 1875 0.4096 MSTRLSTSLCDHLQREREDKINTLLIRLRQRTFILSLLSLSVIAPLIFLGRREFLEDLYRVTYQTDTLKLNSVEQIREGAGELEEPNQVVYKQKDVVSTINYSSIKNNDSEESRIAALEINVSGVNHDERQDQDAQKEDLSSIHEDTNVHAVPHKTSKENIKVTNRPSGRIADGHHILNSPSNEGKSQKVEEIKDQILMAKVYLKFAPPSSNSRLKRLELQMKEMERAVEGATRDLDLSRSVLQKMRHMEASLSSVGRAFSDCSMVAKLQAVKHKTEEQVRFQRRQATYLVQLAVRTAPKGFHCLSMRLTAEYFALRPEERKLPNENMIHHPELYHYAVFSDNVLACAVVVNSTVSTAKEPEKLVFHIVTNSLYLPAISMWFLINSPGKATVHIQNIDNFEWLSKYNPFGKINNGDPGYTSELNYLLFYLPDIFPALNKIVIFDHDVVVQQDLSGLWNANMKENVIGAVGTCQEGKTPFHRIDTFINFSDPLIGESFDVNTCTWAFGMNLFDLQQWRRHNLTAAYHKYLQMGSKKPLWNWNFRRLPLGWLTFYNKTELLDRRWHILGLGHNSGVDRNEIEQAAVIHFDGIRKPWLDIAMGRYKSYWTKFLDFDHPFLQQCNLQA 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00148 624 Pfam Glycosyl transferase family 8 304 598 IPR002495 GO:0016757
Car04g00148 624 Coils Coil 266 286 - -
Car04g00148 624 PANTHER HEXOSYLTRANSFERASE 25 623 - -
Car04g00148 624 MobiDBLite consensus disorder prediction 165 188 - -
Car04g00148 624 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 337 614 IPR029044 -
Car04g00148 624 Coils Coil 215 235 - -
Car04g00148 624 SUPERFAMILY Nucleotide-diphospho-sugar transferases 335 621 IPR029044 -
Car04g00148 624 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 25 623 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00148 Car-Chr4 1474127 1481578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00148 26 624 Glycosyltransferase AT1G06780 46.019 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00148 K13648 - gmx:100819088 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00148 04 1474127 1481578 Car04g00148 04 1474127 1481578 ECH
Car03g02294 03 68906102 68912824 Car04g00148 04 1474127 1481578 PCT