Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00145 ATGTCTTCCATTACCCCAACTCCAACTTCCCCACTCACCCCACGCGCCAACACACCCTCCAACTACCCCACGCGCCGTCCATGGGACAACTTCTTCTCCCTCCAAACCTTCACGACCCCTTACTCCATCGCCGAAGCCACCCACCGCCTGAAGCGCAACCTTAACCATTTCCGCGTTAACTACACCACCATTCTCCTCTTCATTCTCTTCCTCAGCCTTCTCTGGCACCCCCTCTCTCTCATCGTCTTCCTCGCCATCTTCGCCGCCTGGTTCTTCCTCTTCTTCTACCGAAACCACCCCGTCGTCATTCTCCGCTGCACAATCGACGACCGTATCCTCCTCGCCGCACTATCGACGCTCACTGTCGTCGCCCTCGTTTTCACCGGCGTCTGGCTCAATGTCTTGGTGTCGATTCTCGTCGGCGCCGCGGTGGTTGTGTTGCATGCGGCTTTTCGAAGCACTGAGGATTTGTATTCAGATGAAGTTGATATCTTCGATGGAGGATTGCTTTCGGTTGTTGGTAATAGCTTCACCGCCAAGCGAACAGGGTGTGCTGCAGAGCCCTGTTTTGACTTCTTGCGGGTGAAACAATTTTGCCAAAAAGAGGCCATGGCAGTGCCGCTGCCCATTGCTAGTGTGACAGAAATTCCGCAGATGCAACCACGAAATCTGTAG 675 0.5452 MSSITPTPTSPLTPRANTPSNYPTRRPWDNFFSLQTFTTPYSIAEATHRLKRNLNHFRVNYTTILLFILFLSLLWHPLSLIVFLAIFAAWFFLFFYRNHPVVILRCTIDDRILLAALSTLTVVALVFTGVWLNVLVSILVGAAVVVLHAAFRSTEDLYSDEVDIFDGGLLSVVGNSFTAKRTGCAAEPCFDFLRVKQFCQKEAMAVPLPIASVTEIPQMQPRNL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00145 224 MobiDBLite consensus disorder prediction 1 24 - -
Car04g00145 224 PANTHER PRA1 FAMILY PROTEIN 9 180 - -
Car04g00145 224 Pfam PRA1 family protein 22 161 IPR004895 -
Car04g00145 224 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 9 180 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00145 Car-Chr4 1450056 1451891 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00145 K20359 - gmx:100815700 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00145 04 1450056 1451891 Car04g00319 04 3273012 3274774 ECH
Car04g00145 04 1450056 1451891 Car04g00145 04 1450056 1451891 ECH
Car03g02297 03 68942476 68943783 Car04g00145 04 1450056 1451891 PCT