Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00104 ATGGATTCACTTCAAGATTTTATGGATTCATGTAACTCTGACAACAGTTGTAGCCTcaccaacagcaccatcaccaccacaaccaacaccaacagcaccaccaccaccaccaacaacaacaccTTGGTATGTAGCTCTTCACCTTCTGCTTCAACCACCACAAGCAGCCGGTATGAGAACCAGAAACGCCGTGATTGGAACACCTTTGGACAGTACCTTAAGAATCACCGCCCTCCTCTCTCCCTCTCCAGATGTAGCGGTGCACATGTTCTTGAATTTCTCCGGTATTTGGACCAATTTGGGAAGACAAAAGTGCATACACCAATATGTCCATTCTATGGACATCCAAATCCTCCAGCACCATGTCCATGTCCACTAAGACAAGCTTGGGGTAGCCTTGATGCACTTATAGGTCGTTTAAGGGCAGCTTTTGAGGAAAATGGAGGGAAGCCTGAAACAAATCCATTTGGTGCTAGAGCTGTTAGACTTTATCTTCGTGAGGTTCGTGATCTTCAATCCAAAGCAAGAGGTATTAGTTATGAGAAGAAGAAAAGAAAACGTCCTCCacaacaacaacaacaacaacaacaacttcagcaacaacatcatcatcatcaacaacaacaacaacaacaaTCAATGTCtcttcctcttcatcttcatcaccatcaccaacatcaccttccaccaccaGTAGTGCTGTCACTTCACTTGAAGGGAAATAACGAAATAAAGGAAAAATTAATGGCAGACAATTTAGGTTATGCCATCCAGATTGGAGACCCTTCAAATCTCACTCTACCTAATAGTGAATGTACATTCAATTAA 828 0.3285 MDSLQDFMDSCNSDNSCSLTNSTITTTTNTNSTTTTTNNNTLVCSSSPSASTTTSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPQQQQQQQQLQQQHHHHQQQQQQQSMSLPLHLHHHHQHHLPPPVVLSLHLKGNNEIKEKLMADNLGYAIQIGDPSNLTLPNSECTFN 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00104 275 Pfam ALOG domain 49 170 IPR006936 -
Car04g00104 275 ProSiteProfiles ALOG domain profile. 57 184 IPR006936 -
Car04g00104 275 PANTHER G1-LIKE PROTEIN 1 232 - -
Car04g00104 275 PANTHER PROTEIN G1-LIKE2 1 232 IPR040222 -
Car04g00104 275 MobiDBLite consensus disorder prediction 22 61 - -
Car04g00104 275 MobiDBLite consensus disorder prediction 175 229 - -
Car04g00104 275 MobiDBLite consensus disorder prediction 22 57 - -
Car04g00104 275 MobiDBLite consensus disorder prediction 190 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00104 Car-Chr4 1043322 1045912 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00104 - - gmx:100803605 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00104 04 1043322 1045912 Car04g00104 04 1043322 1045912 ECH
Car03g02332 03 69229115 69231177 Car04g00104 04 1043322 1045912 ECH
Car04g02596 04 49456436 49458657 Car04g00104 04 1043322 1045912 ECH
Car04g00104 04 1043322 1045912 Car03g02332 03 69229115 69231177 PCT