Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02907 ATGGCTGCAATATGGTGGAGGAGGAAATGGTACAAAATTTGTTATAATCTGTTGGAAATAGGTCGGCGGCAGAGAAAGGAGGATTATCTCCAGTTAAGGAAGCAGAAACGGCATGAATATATCTTCAAGAAACGAAGGGAGGGTTGTTACAACGATACTTGTCAAGAAATCAAAACACTTGTGGAAGATATTCCTATGGTGGCACATAAACTATGGTCTGATGACCCTGATGAACTAGTGGAAGGAACTACTCAGATTAGAAAAATATTATCTCGATTCTACGTGGACCCTCCATTTGATGAGGTGATTCTGGCCGGTGTTGTCCCAAAATTTGTGGAGTTTTTGACCAGGGACGATTTACCTGAATTACAGTGGCAGGCTGCGTCGATTTTAGCCTACATGGTTTGGGCAAAGTCTGAACAGACAAGAGTTGTAATTGAATTTGGTGCCATTCCCATGTTATTGCGGATTCTAATATCTTGTACTAGTTCTTATCACATAAAAAATGAGGCAGCATGGGTTTTAGGTAATATTTCAATGGATTCCTTGGCTGCAAGGGATCTTATTCTTGATCACGGTGGACTCATACCATTAGCGTCTCTGTTGTCTAGTCCACAAATTTCAGATGTCTTCACCATTGTTCCATGGACCTTGGCTAACTTGTGTCGTAAACCTTCTCCACCTTTTCAAAAGATAAAGCCTTTATTACCTGTCCTTATAGACCTCATCGTGATGCCTGATGAAAAGGTTGTAAGAGATGCATGTTGTGCTCTGTCTTGCCTTAGTGAAGGCTCTGATGAGATGATCGAAGCTATCATCAAAGCAGGTTTTATCCCAAGACTTGTGGCACTACTGATGCATCAATCAGCAGAATATGCTGAGCCAGCTCTTCGTACAATTGGAAATATTGTTTGCGGTAGCACGGCACAGGCTCAGGCTGTGATAGACAATAGAGTTCTCCATTGTTTTTACCTACTTCTTACAGCAGTATGTCATGATACAACAATGATATCAGAAATATGTTGGATAATTTCAAATATCACAACTGATACTACAACTCAATTAGAGGCTGTAATTGACGCGGATCTTATTCGTCCTCTTGTTCGTCTTACAAGGGCTGAATTTCCCATCAAGAAGGAGGCTGCTTGGGCTATATCCAATGCCTGTATGCTCGGAACTACTGAACAGATTCAGATGTTGGTGAATTCAGATTGCATTATAGCACTATGTGATCTCTTGTCCTGTTCTGATCTAGAGGTTGTGGTATTTTGTCTGGAGGCACTAGAAAACATTTTAAGTGTTGCTGAATTGGAAGAGTACTATCTAGTCATTGATGGACCCAATTTGCATGCTCAATTGATGCATCAATGTGGAGGATGGGATAAGATTCTAAATTTGCTCACCAATGGAAACCTTCAAATTTTTGAGAGATCTACTCAGATGTTACTCAGATTTTGGAGTGAGGATTTTGATGTGTTCTGTCAGAATAGTCGTCATTACAGATCTTTTTCTTTTGGAACCAAAGTTCCATTTGCTTTCATAATTTCTCCTAACTAA 1557 0.4014 MAAIWWRRKWYKICYNLLEIGRRQRKEDYLQLRKQKRHEYIFKKRREGCYNDTCQEIKTLVEDIPMVAHKLWSDDPDELVEGTTQIRKILSRFYVDPPFDEVILAGVVPKFVEFLTRDDLPELQWQAASILAYMVWAKSEQTRVVIEFGAIPMLLRILISCTSSYHIKNEAAWVLGNISMDSLAARDLILDHGGLIPLASLLSSPQISDVFTIVPWTLANLCRKPSPPFQKIKPLLPVLIDLIVMPDEKVVRDACCALSCLSEGSDEMIEAIIKAGFIPRLVALLMHQSAEYAEPALRTIGNIVCGSTAQAQAVIDNRVLHCFYLLLTAVCHDTTMISEICWIISNITTDTTTQLEAVIDADLIRPLVRLTRAEFPIKKEAAWAISNACMLGTTEQIQMLVNSDCIIALCDLLSCSDLEVVVFCLEALENILSVAELEEYYLVIDGPNLHAQLMHQCGGWDKILNLLTNGNLQIFERSTQMLLRFWSEDFDVFCQNSRHYRSFSFGTKVPFAFIISPN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02907 518 SMART arm_5 393 433 IPR000225 GO:0005515
Car03g02907 518 SMART arm_5 181 223 IPR000225 GO:0005515
Car03g02907 518 SMART arm_5 224 263 IPR000225 GO:0005515
Car03g02907 518 SMART arm_5 138 180 IPR000225 GO:0005515
Car03g02907 518 SMART arm_5 307 349 IPR000225 GO:0005515
Car03g02907 518 SMART arm_5 351 390 IPR000225 GO:0005515
Car03g02907 518 SMART arm_5 265 305 IPR000225 GO:0005515
Car03g02907 518 SMART arm_5 94 136 IPR000225 GO:0005515
Car03g02907 518 Gene3D - 61 487 IPR011989 -
Car03g02907 518 PIRSF Importin_alpha 5 513 IPR024931 GO:0005737|GO:0006606|GO:0061608
Car03g02907 518 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 149 193 IPR000225 GO:0005515
Car03g02907 518 PANTHER IMPORTIN SUBUNIT ALPHA-4 7 489 - -
Car03g02907 518 Pfam Armadillo/beta-catenin-like repeat 265 303 IPR000225 GO:0005515
Car03g02907 518 Pfam Armadillo/beta-catenin-like repeat 394 432 IPR000225 GO:0005515
Car03g02907 518 Pfam Armadillo/beta-catenin-like repeat 356 389 IPR000225 GO:0005515
Car03g02907 518 Pfam Armadillo/beta-catenin-like repeat 139 179 IPR000225 GO:0005515
Car03g02907 518 ProSiteProfiles IBB domain profile. 1 54 IPR002652 GO:0006606|GO:0061608
Car03g02907 518 PANTHER IMPORTIN ALPHA 7 489 - -
Car03g02907 518 Pfam Importin beta binding domain 7 84 IPR002652 GO:0006606|GO:0061608
Car03g02907 518 SUPERFAMILY ARM repeat 19 488 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02907 Car-Chr3 74331892 74333987 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02907 K15042 - egr:104414680 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02907 03 74331892 74333987 Car03g02907 03 74331892 74333987 ECH