Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02897 ATGTCATTCTCTTTCTCTTCAACCTCTCTATCATTCTCACTCTCAAGACCAACACATCTATGCTCAAATCTTCACACAATCACGAGTGCATCAAATAGCTTTAATTCAGTATCAAGTGGTGGTCGTCTTGTACTGAATGTTGGAGGTTCTACCTTCTGTCGAAGATTTCGTGGTTTCAAGCTGTGGATACTTGACAGACTTAATAATGATATAGGAACAGGTTTATCAAATGAAAAAGGATCAATTTCTGATTCATCTCGTGTACCTCATGCTGGCGATAGTGAGGTAACTTCTTCAGTGGAGTCTCCATCTTTGCTGCAAACAAGTTCCTTGGCCTTTCCCATGGATGTAAGTAAAGAACCTTCACTGTGTATTGCTGTCATAGGAGCCACTGGTGAGTTGGCAAGGGGGAAGATTTTTCCAGCTTTATTTGCACTCTACTATAGTGGCTTTTTTCCTGAGAATGTTGCCATTTTTGGGTATTCAAGGAAGAATATAACTGACGAAGACCTACGGTCCATTATAGCTTCAACATTAACATGTCGAGTTGATCACCAGCAGGATTGtggggataaaatagacgctttccttggtagaacatattacatcaacggaggttacgacaacaaacacgggttgtccttACTAAATGCCAGAATGGAGCAGATTGAGGGAAGATCCAAAACCAACAGGATTTTCTACCTTTCTGTGCCACAAGAAGCACTTTTGGATGTTGCTTCATGTCTTGCTAGCAGTGCTCAGACACAAAAGGGATGGAATCGCATAATAATTGAGAAGCCATTTGGCTTTGATGCTCTCTCTTCCCAAAGTCTGACGCATTATCTTCTTACGAAGTTTGAGGAAAAGCAAGTATATAGGATTGATCATCTTCTAGGAAGGAATCTCATTGAAAACCTCACAGTTTTAAGGTTTGCAAATCTAGTTTTTGAGCCGCTGTGGAATCGTAATTACATACATAATGTGCAGGTCATTTTATCGGAGGACTTGGCTGTGCATCCAGGAAGGTATTTCGGTGGTTATGGGATTATCCGTGATATTGTTCACAGCCATGTGCTCCAAACAATTGCATTGCTTGCCATGGAACCGCCAATCAGCCTTGATGGAGAAGATATTCGGAATGAAAAGGCCAAGCTTTTAAGATCAATTCGCAAATTGGAGCCTAAGGATGTCATTCTTGGCCAATATAAAGCAAGTAACAGAGACAAAATTGACAAGTGCTTAGATGGCCCTACACCTACATATTTTGCAGCTGCGCTATACATTGACAATGCACGATGGGACGGTGTACCATTTTTGGTTAAAACAGGCCTGGGACTCGTCAAACACCAAATGGAGATACGGATTCAATTTCGAAATGTTCCAGGAAATGTTTACAATGAATGCATCGGGCACAATATTGACCGTGCCACAAACGAGCTCATTCTTCGTGATGTTCCCGATGAAGCTATTCTGGTGAGAGTTAACAACAAGGTTCCAGGATTAGGCTTACAACTGGACTTTTCAGAATTAAACTTACTTTACAAGGACAAGTACAACATGGAGGTGCCGGATTCATACGAGCATCTTCTGCTTGATGTCATTGATGGGGATAACCATCTGTTTATGAGAAGCGATGAGCTTGCGGCGGCGTGGAACATTTTAACTCCAATTCTAAATGAGATAGACAAGGACCATATATCAGTGGAGCTTTATGAGTTGGGGGGTCGTGGTCCAGTTGGGGCATACTACCTCTGGGCGAAACATGGTGTCCGTTGGGTAGAGGAATAG 1788 0.4027 MSFSFSSTSLSFSLSRPTHLCSNLHTITSASNSFNSVSSGGRLVLNVGGSTFCRRFRGFKLWILDRLNNDIGTGLSNEKGSISDSSRVPHAGDSEVTSSVESPSLLQTSSLAFPMDVSKEPSLCIAVIGATGELARGKIFPALFALYYSGFFPENVAIFGYSRKNITDEDLRSIIASTLTCRVDHQQDCGDKIDAFLGRTYYINGGYDNKHGLSLLNARMEQIEGRSKTNRIFYLSVPQEALLDVASCLASSAQTQKGWNRIIIEKPFGFDALSSQSLTHYLLTKFEEKQVYRIDHLLGRNLIENLTVLRFANLVFEPLWNRNYIHNVQVILSEDLAVHPGRYFGGYGIIRDIVHSHVLQTIALLAMEPPISLDGEDIRNEKAKLLRSIRKLEPKDVILGQYKASNRDKIDKCLDGPTPTYFAAALYIDNARWDGVPFLVKTGLGLVKHQMEIRIQFRNVPGNVYNECIGHNIDRATNELILRDVPDEAILVRVNNKVPGLGLQLDFSELNLLYKDKYNMEVPDSYEHLLLDVIDGDNHLFMRSDELAAAWNILTPILNEIDKDHISVELYELGGRGPVGAYYLWAKHGVRWVEE 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02897 595 PRINTS Glucose-6-phosphate dehydrogenase signature 261 274 IPR001282 GO:0006006|GO:0016614|GO:0050661
Car03g02897 595 PRINTS Glucose-6-phosphate dehydrogenase signature 285 313 IPR001282 GO:0006006|GO:0016614|GO:0050661
Car03g02897 595 PRINTS Glucose-6-phosphate dehydrogenase signature 336 353 IPR001282 GO:0006006|GO:0016614|GO:0050661
Car03g02897 595 PRINTS Glucose-6-phosphate dehydrogenase signature 354 370 IPR001282 GO:0006006|GO:0016614|GO:0050661
Car03g02897 595 PRINTS Glucose-6-phosphate dehydrogenase signature 432 458 IPR001282 GO:0006006|GO:0016614|GO:0050661
Car03g02897 595 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 83 595 IPR001282 GO:0006006|GO:0016614|GO:0050661
Car03g02897 595 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 123 593 IPR001282 GO:0006006|GO:0016614|GO:0050661
Car03g02897 595 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 122 594 IPR001282 GO:0006006|GO:0016614|GO:0050661
Car03g02897 595 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 308 592 IPR022675 GO:0004345|GO:0006006|GO:0050661
Car03g02897 595 PANTHER INACTIVE GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 4, CHLOROPLASTIC 83 595 - -
Car03g02897 595 MobiDBLite consensus disorder prediction 78 102 - -
Car03g02897 595 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 295 593 - -
Car03g02897 595 Gene3D Dihydrodipicolinate Reductase; domain 2 294 594 - -
Car03g02897 595 Gene3D - 119 293 - -
Car03g02897 595 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 127 305 IPR022674 GO:0006006|GO:0016614|GO:0050661
Car03g02897 595 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 116 308 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02897 Car-Chr3 74259957 74266367 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02897 K00036 - gmx:100796541 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02897 03 74259957 74266367 Car03g02897 03 74259957 74266367 ECH