Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02895 ATGTGCTTCCAAAAGGTGGGTTATTTGCTATTTGCGCTTATAACTAATTTACTACTTAGTGGTCAATATGGGAATTGCAATCGTATTATTGGTCATAATCATATTCATAATAAGTCACACACTCATCACTTAGCCACTAAAAGACTTAACCAAAGTGGTTTTGTTCAACGAAGTGGAATCCATTTTATTCTTAACGGGAAATCATTATACTTGAATGGTTTCAATTCCTATTTTTTAATGAACATAGCAACGGACCCATCTACAAAGTCCAAAGTTACTACAATTTTTCAAGAAACTTCTAAACACGGTTTAAATTTAGCAAGAACATGGGCCTTCAATGATGGAGATTATAAACCTCTTCAAATTTCCCCCGGTACTTATGATGAGGATGTATTTAAGGGATTGGATTTTGTGGTATCGGAAGCAGGGAAATATGGAGTGAAATTGATATTAAGCTTAGTGAATAATTGGAATGATTATGGTGGAAAAAATAAATATGTGAAATGGGGAAAAGAACGAGGCCAAAACGTGAACAACGATGATGATTTCTACATAAATCCCGTTGTTAAGCAATATTACAAAAATCATGTGAAGGCTATTTTGACGAGAAAAAATAGTATTAATGGATTGGCATATAAAGACGACCCTACTATTTTTGCATGGGAGCTTATAAATGAACCTCGTTCTCAAAATGACTCTTCCGGCAAATTAATTCAGGATTGGGTGAGTGAGATGGCTGCATATGTGAAGTCTATTGATAGCAACCATTTACTAGAAGTTGGGCTTGAAGGATTTTATGGTGAAACAACTTCTCGAAACAAACCTGGTTATTATAACGTTGGAACTGATTTCATTTCCAATAACAAAGTTCCACAAATTGATTTTGCCACCATTCATCTCTACCCTGACCAATGGTACTTGGTATCAAGCACAAATGAAACAGCACAAGATGAATTTGTTGACACGTGGGTCAAAGACCATATTCAAGACTCAAATGACGTTTTAAAAAAGCCAATTCTGATAACCGAGTTTGGAAAGTCTTCAAAATCTAGTGGATATAGCCTGGATAAGAGGAATAGTTACTTCAGTAAGTTATACAATTTCGTATACAGTAGCGCTAGTAATGGGGGCCCATGTGTTGGTGGGCTTTTCTGGCAGTTTATGGCCCAAGGATTGGATAACTTGCATGATGGCTATGAAGTCATATTTGAGAATGATCCTTCAACTGCTACTGTTGTTAGTCAACAATCTAAGAGAATGTCAAATCTTAAATAG 1275 0.3569 MCFQKVGYLLFALITNLLLSGQYGNCNRIIGHNHIHNKSHTHHLATKRLNQSGFVQRSGIHFILNGKSLYLNGFNSYFLMNIATDPSTKSKVTTIFQETSKHGLNLARTWAFNDGDYKPLQISPGTYDEDVFKGLDFVVSEAGKYGVKLILSLVNNWNDYGGKNKYVKWGKERGQNVNNDDDFYINPVVKQYYKNHVKAILTRKNSINGLAYKDDPTIFAWELINEPRSQNDSSGKLIQDWVSEMAAYVKSIDSNHLLEVGLEGFYGETTSRNKPGYYNVGTDFISNNKVPQIDFATIHLYPDQWYLVSSTNETAQDEFVDTWVKDHIQDSNDVLKKPILITEFGKSSKSSGYSLDKRNSYFSKLYNFVYSSASNGGPCVGGLFWQFMAQGLDNLHDGYEVIFENDPSTATVVSQQSKRMSNLK 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02895 424 Pfam Cellulase (glycosyl hydrolase family 5) 89 361 IPR001547 GO:0004553|GO:0071704
Car03g02895 424 PANTHER - 40 424 IPR045053 GO:0004553
Car03g02895 424 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 40 424 - -
Car03g02895 424 Gene3D Glycosidases 49 424 - -
Car03g02895 424 SUPERFAMILY (Trans)glycosidases 53 403 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02895 Car-Chr3 74248721 74253048 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02895 51 424 Glycoside Hydrolase AT1G02310 55.906 1.02e-160 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02895 K19355 - gmx:100791612 605.905