Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02894 ATGGGGACTGAAAATCCAGGTCGTCCAAACTTCCCTGCAAGACCTGCTTCCTCACCTTTTGCTGCTGGACAGACTATGACACCTTTTTCATCAATGGGTCCTGTGGCTGGATCAGAGcctccttcttttcgacctactcctcctgctcctccCCAAACCCCCACGCCGTTTGCATCGTCTGGACCTGCTGTTAGACCAGGGGCACCGAGTTTTAGACCTACACCACCAGGCAGGTTCAATGACCCAACCGTGcctcctcctcctcctccatcgtccAATATCCCTCCAGCGCCAGCTGCTGGACCTTTCCAACAATTTTCAGCACCACCCTTTTCCTCGACAGGTCAACCTCTCACACGGCCTCCTCCCTTGGTGCAACCATCAATTCAACAACCTGGAAGTCAAGCACCCTACTTTCCATCATCCCTTCCACCTCAGCCACAGATGCCTTATGTTCAAATGGGGTCTCCAGCTTTAGGATCAAATGTTCCTCCTCCTCAATTTCAACCATCTTTTCCTGGTTATGCCCGTATGCAGCCTGGTGCTGAGATACAAGCTCCACCTATGCAGTCCTCTATTCATGCGAATCAAGGAAATTATGGACCTGCACCCCCTGCAGCATCATCCCCTTTTTCACCTCATCTAGGAGGCTATGCTTCATCACTTCCAGTGGCTACTCCAATTGGTGGCCATCCAACACAGCAACCAGGGTCTGTACCCCCTACTGGTGCCATTCAGGGTTTGACAGAAGACTTCAGTTCACTCACAATGCAAACTCGTCCTGGAACAATGGATCCATTATTTGATGCTAAAGAACTTCCAAGGCCGTTGGATGGTGACGAGGAGCCGAAGCATTTGGCTGAGATTTATCCCATGAACTGCCGTCCCAGATATCTACGATTCACAACCAGCGCAATTCCTAGCTCTCAGTCCCTAGCTTCAAGGTGGCATCTGCCACTTGGAGCAGTTGTATGTCCACTCGCTGAATCTCCAGATGGGGAAGAGGTACCTATAATTAGTTTTGCTCCAGCTAGTGTTGTACGCTGTAGAAGATGCCGCACATACGTGAATCCATATGTGACATTTACAGAAGCTGGAAGAAAGTTCCGGTGTAATGTATGCACCTTGCTTAATGATGTTCCCAGTGAATATTATGCACAATTAGATGCCACTGGAAAAAGAGTCGATTTGAACCAACGACCTGAGCTTACAAAGGGTACTGTAGAATTTGTTGCCCCTGCTGAGTATATGGTGCGGCCTCCTATGCCCCCAGTATATTTCTTCCTCATCGATGTTTCCATATCTGCAGTTAGAAGTGGCATGATTGAGATTGCGGCCCAGGCAATCAAGTCCTGCTTAGATGAGCTTCCTGGCTCCCCACGAACACAAATTGGGTTTGCAACTTTTGACAGCACTATACATTTTTATAACATGAAGTCAAGCTTGACTCAACCACAGATGTTGGTAGTCTCAGATCTGGACGACATATTTATTCCACTACCTGATGATCTTCTTGTTAACTTATCTGAATCAAGAGATGTGGTGGAAGCCTTCCTAGATAGTTTGCCAACTATGTTTCAAGATAATGTTAATCTGGAATCAGCTTTCGGTCCTGCTCTTAAGGCTGCTTTTATGGTTATGAGTCAACTTGGAGGGAAATTGTTAATTTTCCAAAACACACTTCCATCTCTTGGTGTCGGTCGCTTGAAGTTACGCGGAGATGATTCTCGTATTTATGGGACTGATAAAGAACATGGACTGAGACTGCCCGAAGATCCATTTTATAAACAAATGGCTGCCGAGTTTTCTAAGTATCAAATCTCCGTAAATGTGTATGCATTCAGTGATAAGTACACTGACATAGCCTCCTTAGGAACTCTGGCAAAGTACACTGCTGGTCAGGTGTATTACTATCCAGCTTTCTTATCAGCCATTCATGGGGAGAAATTGAGACATGAATTAAGGAGAGATCTCACTAGAGAGACTGCATGGGAAGCTGTAATGCGTATTAGATGTGCAAAAGGTGTTCGCTTCACAACTTATCATGGAAACTTCATGCTAAGGTCCACGGATTTGTTAGCACTTCCAGCCGTAGATTGTGATAAAGCCTTTGCCATGCAGTTATCACTTGAAGAGACATTACTGACAACTCAAACTATTTATTTTCAAGTTGCATTGCTATATACTGCATCTTGTGGAGAAAGGCGTATCAGAGTACACACAATGGCAGTGCCAGTAGTTACAGACTTGGCGGATATCTATCGCCTGGCTGATGCTGGTGCAGTTGTGTCTCTATTTAGTAGGCTAGCAATTGAGAAAACATTGTCCCAAAAACTGGAAGATGCACGGAGTGCTGTGCAACTGAGAATTGTGAAAGCCCTCAAGGAGTATCGGAATCTTTATGCTGTGCAACATCGTTTAACCAACAGAATAATATATCCAGAGTCTTTGAAGTTCCTAATGTTGTATGGACTAGCTCTCTGTAGATCATCGGCTCTACGCGGAGGGTATGGCGATGTTCCTCTGGATGATCGATGTGCATCAGGACATACAATGATGACTCTACCAATAAAAAGATTGTTGAAACTTCTCTATCCTAGCTTGATTCGAGTTGATGAATATCTTCTGAAGGCATCTGTACAAGCTGATGACTTAAAAAGTATCGAGAGAAGGTTACCTTTGACCGGGGAAAGCTTAGACTCTAGGGGTCTTTATATATATGATGATGGCTTCCGGTTCATTATATGGTTTGGTAGGGTGATTTCACCTGATATAGCAAAGAATTTACTCGGGGCAGACTTTGCAGCAGAATTATCGAAGGCTACTCTCAATGAGCATAATAATGAAATGTCAAGGAGGCTGATGAGGGTACTTGAAAAATTAagaaatgacgatcgtgcatattaccagttgtgccaccttgtgaggcaagATATCCCGACAAGTGCAACACTCATAATATATAGTGACTTGAAGGCAGGGTTTGGGTCTTACCTTGTGAAGCTAAGTTTCCCAGGCTAG 3021 0.431 MGTENPGRPNFPARPASSPFAAGQTMTPFSSMGPVAGSEPPSFRPTPPAPPQTPTPFASSGPAVRPGAPSFRPTPPGRFNDPTVPPPPPPSSNIPPAPAAGPFQQFSAPPFSSTGQPLTRPPPLVQPSIQQPGSQAPYFPSSLPPQPQMPYVQMGSPALGSNVPPPQFQPSFPGYARMQPGAEIQAPPMQSSIHANQGNYGPAPPAASSPFSPHLGGYASSLPVATPIGGHPTQQPGSVPPTGAIQGLTEDFSSLTMQTRPGTMDPLFDAKELPRPLDGDEEPKHLAEIYPMNCRPRYLRFTTSAIPSSQSLASRWHLPLGAVVCPLAESPDGEEVPIISFAPASVVRCRRCRTYVNPYVTFTEAGRKFRCNVCTLLNDVPSEYYAQLDATGKRVDLNQRPELTKGTVEFVAPAEYMVRPPMPPVYFFLIDVSISAVRSGMIEIAAQAIKSCLDELPGSPRTQIGFATFDSTIHFYNMKSSLTQPQMLVVSDLDDIFIPLPDDLLVNLSESRDVVEAFLDSLPTMFQDNVNLESAFGPALKAAFMVMSQLGGKLLIFQNTLPSLGVGRLKLRGDDSRIYGTDKEHGLRLPEDPFYKQMAAEFSKYQISVNVYAFSDKYTDIASLGTLAKYTAGQVYYYPAFLSAIHGEKLRHELRRDLTRETAWEAVMRIRCAKGVRFTTYHGNFMLRSTDLLALPAVDCDKAFAMQLSLEETLLTTQTIYFQVALLYTASCGERRIRVHTMAVPVVTDLADIYRLADAGAVVSLFSRLAIEKTLSQKLEDARSAVQLRIVKALKEYRNLYAVQHRLTNRIIYPESLKFLMLYGLALCRSSALRGGYGDVPLDDRCASGHTMMTLPIKRLLKLLYPSLIRVDEYLLKASVQADDLKSIERRLPLTGESLDSRGLYIYDDGFRFIIWFGRVISPDIAKNLLGADFAAELSKATLNEHNNEMSRRLMRVLEKLRNDDRAYYQLCHLVRQDIPTSATLIIYSDLKAGFGSYLVKLSFPG 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02894 1006 PANTHER SEC24-RELATED PROTEIN 27 983 - -
Car03g02894 1006 Pfam Sec23/Sec24 helical domain 758 861 IPR006900 GO:0006886|GO:0006888|GO:0030127
Car03g02894 1006 SUPERFAMILY vWA-like 421 660 IPR036465 -
Car03g02894 1006 Pfam Sec23/Sec24 trunk domain 421 657 IPR006896 GO:0006886|GO:0006888|GO:0030127
Car03g02894 1006 Gene3D von Willebrand factor, type A domain 423 660 IPR036465 -
Car03g02894 1006 MobiDBLite consensus disorder prediction 68 97 - -
Car03g02894 1006 Pfam Sec23/Sec24 beta-sandwich domain 663 747 IPR012990 -
Car03g02894 1006 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 875 982 IPR036180 -
Car03g02894 1006 MobiDBLite consensus disorder prediction 192 246 - -
Car03g02894 1006 Gene3D Sec23/Sec24 helical domain 747 865 - -
Car03g02894 1006 MobiDBLite consensus disorder prediction 227 246 - -
Car03g02894 1006 Pfam Sec23/Sec24 zinc finger 347 384 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Car03g02894 1006 SUPERFAMILY Zn-finger domain of Sec23/24 339 420 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Car03g02894 1006 MobiDBLite consensus disorder prediction 1 179 - -
Car03g02894 1006 PANTHER OS04G0129500 PROTEIN 27 983 - -
Car03g02894 1006 Gene3D Severin 866 983 IPR029006 -
Car03g02894 1006 Gene3D - 294 746 - -
Car03g02894 1006 CDD Sec24-like 421 662 IPR041742 GO:0006886|GO:0006888|GO:0030127
Car03g02894 1006 MobiDBLite consensus disorder prediction 40 57 - -
Car03g02894 1006 Pfam Gelsolin repeat 893 944 IPR007123 -
Car03g02894 1006 SUPERFAMILY Helical domain of Sec23/24 758 865 IPR036175 GO:0006886|GO:0006888|GO:0030127
Car03g02894 1006 SUPERFAMILY beta-sandwich domain of Sec23/24 185 756 - -
Car03g02894 1006 Gene3D - 293 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02894 Car-Chr3 74232823 74242883 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02894 K14007 - gmx:100791083 1618.98