Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02878 ATGGCAGATCAAGAGGAAACAGAAGAACTCAAACTTCTCACTCAATGGAAGAGAAAGAAAGGTGGATTCAGAGCTTCCATGTTTATATTTGTGTTGTCAGCATTGGACAACATGGGTTTTGTGGCAAACATGGTGAGCTTGGTTTTATACTTTTATGGAGTGATGCACTTTGATCTATCAAGTTCTGCCAATACTCTCACAAACTTTATGGGTTCAACTTTCTTGCTTTCCCTTGTTGGTGGCTTCATCTCAGATACTTATTTAAATAGATTCACCACATGCTTGCTTTTTGGATCACTTGAAGTTCTAGCATTGGCAATGCTTACAGTTGAAGCTGCTTCAGATCATTTACATCCAAATGCATGTGGGAAATCAAGTTGTGTAAAAGGGGGCATAGGAGTAATGTTTTACACATCACTATGTTTGTTGGCATTAGGAATTGGAGGGGTAAGAGGATCCATGACACCATTTGGTGCTGACCAATTTGAAGAAAAGGATCCAAATGAGGCAAAAGGTCTTGCAAGTTTTTTCAATTGGCTTTTGTTAAGTTCAACTCTAGGAGCAATTACAGGTGTTACATTTGTTGTTTGGGTTAGTACACAAAGAGCTTGGCATTGGGGATTTTTCATAATAACCATAGCTTCTTCAATTGGTTTTGTCACACTTGCTCTTGGTAAGCCTTTCTATAGAATCAAAACTCCAGGTGATAGTCCCACACTCAGAATTGCTCAGGTTATTGTTGTGGGTTTTAAAAACCGAAAGTTGTCAGTGCCAGAGTCACACGAAGAACTATATGAAATCAGTGATAAAGATACAACAGTTGAAAAAATTGTCCACACAAATCAAATGAGGTTTCTAGATAAAGCAGCCATTCTCCAAGAAAACATGAAACCCCAACCATGGAAAGTGTGCACAGTGACACAAGTTGAAGAAGTTAAGATTCTAACAAGAATGTTACCAATAGTAGCAAGTACCATAATAATGAACACATGTTTAGCACAGCTTCAAACATTCTCAGTTCAACAAGGGAATGTAATGAACCTTAAACTTGGTTCATTTACAGTTCCAGCACCATCAATTCCAGTTATACCCCTTATTTTCATATCCATCTTGGTACCAATTTATGAGCTTTTCTTTGTTCCATTTGCAAGAAAAATCACACACCACCCTTCAGGCATCACACAACTCCAAAGGGTAGGTGTTGGATTGGTACTCTCAGTTATATCAATGACAGTGGCTGGATTTGTAGAGGTAAAAAGAAGGGACCAAAGTAGAAAAGACCCTTCTAACCCTATAAGCCTATTTTGGCTTTCATTCCAATATGGTATATTTGGTATTGCAGATATGTTCACACTTGTTGGACTATTGGAATTTTTTTATAGAGAATCACCTTCAAGCATGAAATCATTGTCAACATCTTTAACATGGTTGTCAATGTCTATTGGTTACTTTTTGAGCACTGTTTTTGTCAATTTGATTAATGTTGTTACCAAAAGGCTCACTCCTAGTAAACAAGGTTGGTTACAAGGGTTTGATTTGAATCAAAATAATTTGAACTTGTTTTATTGGTTCCTAGCTATACTAAGTTGCCTTAATTTTTTCAACTACCTTTATTGGGCCTCAAGCTACAAGTACAAATCTGAAGACCAAAATTCAAGCCCAATAGGTTTGAAGACATTAAATGAAATGCCTCTTAAACATAATTGGGAAGCCAACATTGGTGGAAGCACTCAAGACTGA 1740 0.3713 MADQEETEELKLLTQWKRKKGGFRASMFIFVLSALDNMGFVANMVSLVLYFYGVMHFDLSSSANTLTNFMGSTFLLSLVGGFISDTYLNRFTTCLLFGSLEVLALAMLTVEAASDHLHPNACGKSSCVKGGIGVMFYTSLCLLALGIGGVRGSMTPFGADQFEEKDPNEAKGLASFFNWLLLSSTLGAITGVTFVVWVSTQRAWHWGFFIITIASSIGFVTLALGKPFYRIKTPGDSPTLRIAQVIVVGFKNRKLSVPESHEELYEISDKDTTVEKIVHTNQMRFLDKAAILQENMKPQPWKVCTVTQVEEVKILTRMLPIVASTIIMNTCLAQLQTFSVQQGNVMNLKLGSFTVPAPSIPVIPLIFISILVPIYELFFVPFARKITHHPSGITQLQRVGVGLVLSVISMTVAGFVEVKRRDQSRKDPSNPISLFWLSFQYGIFGIADMFTLVGLLEFFYRESPSSMKSLSTSLTWLSMSIGYFLSTVFVNLINVVTKRLTPSKQGWLQGFDLNQNNLNLFYWFLAILSCLNFFNYLYWASSYKYKSEDQNSSPIGLKTLNEMPLKHNWEANIGGSTQD 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02878 579 Gene3D MFS general substrate transporter like domains 3 552 IPR036259 -
Car03g02878 579 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 557 - -
Car03g02878 579 Pfam POT family 91 507 IPR000109 GO:0016020|GO:0022857|GO:0055085
Car03g02878 579 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 557 IPR000109 GO:0016020|GO:0022857|GO:0055085
Car03g02878 579 SUPERFAMILY MFS general substrate transporter 15 546 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02878 Car-Chr3 74103401 74108032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02878 4 555 Organic Solute Cotransporters AT1G59740 42.274 9.81e-146 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02878 K14638 - aprc:113861407 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02878 03 74103401 74108032 Car03g02878 03 74103401 74108032 ECH
Car03g02878 03 74103401 74108032 Car04g00649 04 6428603 6432896 PCT