Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02871 ATGCTGCGTTTGAAAGCGTTTCGTCCTTCTACCGATAAAATCGTTAAGATCCAATTACATCCGACGCATCCATGGATGGTAACTGCCGACGATTCAGATCGAGTTTCTGTTTGGAACTGGGAACACCGTCAGGTGATTTACGAGTTGAAAGCTGGTGGAGTCGATGAGCGACGTTTGGTTGGGGCAAAATTGGAGAAACTGGCTGAGGGAGAAACAGAGTCCAAAGGAAAACCTACAGAAGCCATTCGTGGAGGAAGTGTTAAGCAGGTGAATTTTTATGATGATGATGTACGGTTTTGGCAACTTTGGCATAATCGCTCTGCAGCGGCGGAGGCTCCAACAGCTGTCCATACTTCAGCTTTTAGTTCTCCTGCCCCGTCAACAAAAGGGAGGCATTTTCTTGTCATATGCTGTTTAAACAAAGCTATATTTTTGGATTTGGTGACAATGCGTGGCCGTGATGTACCAAAACAAGAGCTTGATAACAAGTCCCTTCACTGCATGGAGTTCCTTTATAGATCTGGCGTTGGTGATGGTCCTCTTGTGGCTTTTGGGGCATCTGATGGAGTCATTAGAGTTCTCTCAATGATTACATGGAAGCTTGCACGAAGGTACACCGGAGGTCATAAAGGAACAATCTCTTGCTTGAGGTCCTTCATGGCAGCTTCAGGCGAGGCTCTTCTGGTTTCGGGTGCTAGTGATGGATTGCTCATAATTTGGAGTGCTGATCATGGACAAGATTCACGTGAACTTGTACCCAAGCTGAGTTTAAAAGCGCATGATGGTGGGGTTGTGGCAGTTGAGCTCTCTAGAGTGATGGGAGGTGCTCCTCAACTAATTACAATTGGTGCAGATAAGACATTAGCAATATGGGACACAGTCTCCTTTAAGGAGCTGAGGCGTATAAAACCAGTTCCAAAATTGGCTTGCCACAGTGTGGCTTCTTGGTGCCACCCTCGAGCTCCAAACCTTGATATTCTAACCTGTGTAAAAGATTCTCACGTATGGGCAATCGAGCATCCCACATATTCTGCTCTCACTAGGCCATTGTGCGAATTGACCACAGTTATTCCTCCACATGCTCTTGCCCCTAATAAGAAACTGAGGGTGTATTGTATGGTTGCACATACATTGCAGCCACACCTTGTTGCTATTGGAACCAATATTGGTGTTGTTATCTGCGAGTTTGATGCTAGATCTCTACCACCTGTTGCTCCCCTACTTACCCCACCAGATAGTAGAGAGCATTCTGCTGTATTTGTAATTGAAAGGGAGCTAAAGCTATTAAATTTTCAATTAAACAACTCTGTAAATCCATCCCTTGGAAATAACAGCTCCTTGTTAGAAACCGGAAGACCTACGGGATATTCTTTTGAACCATTACCTGTCAAGCAGGGGAAGAAGCACATTAGTACACCTGTTCCTCATGATTCATACTCTGTTCTTTCTGTGAGCAGTTCAGGAAAGTACTTAGGAATCGTTTGGCCAGATATTCCTTATTTCTCTGTCTACAAGGTCAGTGATTGGTCAATAGTTGACTCTGGCAGTGCAAGGCTTCTTGCATGGGATACTTGTCGTGACAGATTTGCTATATTGGAATCATCATTGCCCCCTCGAATTCCTATAATTCCTAAGGGTAGTTCATCGAAAAGagcaaaagaagctgctgcagcacaagcagccgcagccgcagctgctgcTGGTTCCTCGGCTTCTGTTCAAGTCCGAATCTTGTTAGATGATGGAACATCAAATATACTAATGAGGTCTGTTGGTGCACGCAGCGAACCAGTCATTGGTTTGCATGGAGGGGCACTACTTGGTGTTGCCTATCGAACATCTAGGAGAATCAGTCCTATTGCAGCTACAGCTATTTCGACAATCCAGTCTATGCCCTTATCAGGTTATGGAAGCAGCGGTCTTTCTTCTTTTACCACTTATGATGATGGATTTTCTTCTCATAGATCTCCAGCTGAGGCGGCACCTCAAAACTTTCAGCTATACAGCTGGGAGACATTTCAGCCTGTGGGGGGTCTACTTCCTCAGCCAGAATGGACTGCTTGGGACCAAACCGTTGAGTATTGTGCATTTGCATACCAACAATACATAGTCATATCTTCTTTGCGCCCACAATATAGATACCTGGGAGATGTTTCAATTCCATATGCTACTAGTGCTGTTTGGCACCGGAGGCAACTGTTTGTGGCAACACCAACTACTATAGAAGTTGTTTTTGTGGACGCTGGGGTTACCCAAGTAGACATTGAAACTAAGAAGATGAAAGAAGAGCAAAAAATGAGAGAAGCACAGACAAGAGCAGTTGCCGAGCATGGAGAGTTAGCACTAATTACAGTTGAAGGTCCCCAATCTACTACAGAAGAAAGAATATCATTAAGGCCTCCGATGCTGCAGGTGGTTCGATTGGCTTCATTTCAGCATGCTCCTTCAGTGCCACCTTTCCTGTCATTACCAAAACATTCTAGAGTTGATGGTGATGACTCTGGGATGACAAAAGAAGCGGAAGAGAGAAGGACAGGTGAAGTAGCGGTTGGTGGTGGGGGTGTGTCCGTGGCAGTTACTCGTTTTCCAATGGAGCAGAAACGTCCAGTGGGGCCTCTTGTTGTGGTCGGTGTCAAGGATGGAGTTCTTTGGCTAATTGACAGGTACATGCGAGCTCACGCCTTATCCTTGAGTCATCCCGGTATTCGTTGTCGATGTCTTGCTGCTTATGGAGATGCTGTTAGTGCAGTAAAATGGGCAAGTAGGCTTGGGAGAGAACACCATGATGATTTAGCACAATTTATGCTAGGAATGGGCTATGCTACTGAAGCACTTCATTTGCCTGGAATATCAAAGAGGTTGGAGTTTGATTTGGCAATGAAGAGCAATGATTTGAAGAGAGCTCTTCATTGTCTTCTTACCATGAGTAACAGCCGGGATATAGGACATGATGGTACTGGGCTTGGTTTGAATGACATTCTCAATTTAACAGATAAAAAACAAGATGTAGTTGAAGGTGCTCAGGGCATTGAAGGTGTTCAGGGCATAGTGAAATTCGCAAAAGAGTTCCTGGATCTTATTGATGCTGCAGATGCTACAGCACAGGGTGAAATTGCCCGTGAAGCTCTGAAGAGATTAGCTGCAGCTGGTTCAGTGAAAGGTGCTTTACAAGGTCATGAGTTGAGGGGATCAGCATTGCGCCTTGCAAATCATGGAGAGTTGACTCGGCTAAGTAGTCTGGTCAACAACTTAATCACACTCGGCTTGGGACGGGAAGCTGCATTTTCTGCTGCTGTTTTGGGTGACAATGCTTTAATGGAGAAAGCATGGCAGGATACTGGAATGCTGGCAGAGGCTGTGCTTCATGCTCATGCACATGGACGTCCAACTCTGAAGAATTTGGTTCAGGCCTGGAACCAAATGCTACAGAGAGAGGTTGAGCCTACTCCATCACAAAAGACAGATGCTACAGCTGCATTTCTAGCTTCTCTTGAGGAGCCTAAGCTTACGAGTTTGGCTGAAGCAGGGAAGAAACCACCTATTGAAATCCTACCTCCTGGGATGGTGTCACTTAATGCCCCCCCTATCTCCATTCAGAAAAAACCAGCTTCTGCTCAGAATTCCCTACCACAACCAGGCAAGCCATTGGCACTGGAAGCGCCTCCTACAACCACAGAAACTCCGGACAGTTCTACGCAGCTGCCTGAATCTGCACCTGCACCAGCCAGTGATCCACCTCCATCAGACTCCACGCCAATTCCTGCGGCCGCTCCACCTGAATCAAATTTGGGCGAAGCCTCTGTAGATAATGGTGGTCCAACTCCAACGCCAGTGAGTGACGAAAACACAAATGTTAATGGGGAAACTGTTCAAGCAGAGCCTACTAACGATCCAACATCGCCTGAGGACCCATCACCAGCAGCAGAGGTTTCAGAGACTAATGTTCCAAATTCAACAACAATACCTGCGAGTAGTGACCCCCTTGTATGA 3990 0.4534 MLRLKAFRPSTDKIVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVIYELKAGGVDERRLVGAKLEKLAEGETESKGKPTEAIRGGSVKQVNFYDDDVRFWQLWHNRSAAAEAPTAVHTSAFSSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLHCMEFLYRSGVGDGPLVAFGASDGVIRVLSMITWKLARRYTGGHKGTISCLRSFMAASGEALLVSGASDGLLIIWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHVWAIEHPTYSALTRPLCELTTVIPPHALAPNKKLRVYCMVAHTLQPHLVAIGTNIGVVICEFDARSLPPVAPLLTPPDSREHSAVFVIERELKLLNFQLNNSVNPSLGNNSSLLETGRPTGYSFEPLPVKQGKKHISTPVPHDSYSVLSVSSSGKYLGIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILESSLPPRIPIIPKGSSSKRAKEAAAAQAAAAAAAAGSSASVQVRILLDDGTSNILMRSVGARSEPVIGLHGGALLGVAYRTSRRISPIAATAISTIQSMPLSGYGSSGLSSFTTYDDGFSSHRSPAEAAPQNFQLYSWETFQPVGGLLPQPEWTAWDQTVEYCAFAYQQYIVISSLRPQYRYLGDVSIPYATSAVWHRRQLFVATPTTIEVVFVDAGVTQVDIETKKMKEEQKMREAQTRAVAEHGELALITVEGPQSTTEERISLRPPMLQVVRLASFQHAPSVPPFLSLPKHSRVDGDDSGMTKEAEERRTGEVAVGGGGVSVAVTRFPMEQKRPVGPLVVVGVKDGVLWLIDRYMRAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGISKRLEFDLAMKSNDLKRALHCLLTMSNSRDIGHDGTGLGLNDILNLTDKKQDVVEGAQGIEGVQGIVKFAKEFLDLIDAADATAQGEIAREALKRLAAAGSVKGALQGHELRGSALRLANHGELTRLSSLVNNLITLGLGREAAFSAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWNQMLQREVEPTPSQKTDATAAFLASLEEPKLTSLAEAGKKPPIEILPPGMVSLNAPPISIQKKPASAQNSLPQPGKPLALEAPPTTTETPDSSTQLPESAPAPASDPPPSDSTPIPAAAPPESNLGEASVDNGGPTPTPVSDENTNVNGETVQAEPTNDPTSPEDPSPAAEVSETNVPNSTTIPASSDPLV 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02871 1329 MobiDBLite consensus disorder prediction 1306 1329 - -
Car03g02871 1329 Gene3D - 905 1159 - -
Car03g02871 1329 PANTHER TSET COMPLEX MEMBER TSTF 1 1187 - -
Car03g02871 1329 SUPERFAMILY WD40 repeat-like 7 315 IPR036322 GO:0005515
Car03g02871 1329 Gene3D - 3 350 IPR015943 GO:0005515
Car03g02871 1329 PANTHER TSET COMPLEX MEMBER TSTF 1 1187 - -
Car03g02871 1329 MobiDBLite consensus disorder prediction 826 846 - -
Car03g02871 1329 SMART WD40_4 250 292 IPR001680 GO:0005515
Car03g02871 1329 SMART WD40_4 1 39 IPR001680 GO:0005515
Car03g02871 1329 SMART WD40_4 198 241 IPR001680 GO:0005515
Car03g02871 1329 MobiDBLite consensus disorder prediction 1223 1238 - -
Car03g02871 1329 MobiDBLite consensus disorder prediction 1239 1254 - -
Car03g02871 1329 MobiDBLite consensus disorder prediction 1200 1329 - -
Car03g02871 1329 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 301 IPR001680 GO:0005515
Car03g02871 1329 MobiDBLite consensus disorder prediction 822 846 - -
Car03g02871 1329 MobiDBLite consensus disorder prediction 1267 1298 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02871 - - gmx:100777567 2252.63