Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02867 ATGGCCCTACAATCACCAATACTTGCTGGGCTAGAAGCCAACCCGAAGACCGTTGCATCGATCATTTTAGGTGGTGGAGCTGGAACTCGTCTATTCCCCCTTACTCAAAAACGGGCTAAACCAGCTGTGCCATTTGGAGGGTGTTATAGGCTTGTGGACATACCAATGAGTAATTGTATCAATAGTGGAATTGATAAAATTTACGTCCTTACACAGTTCAATTCTCGGTCCCTCAATCGCCACATTGCTCGAACATATAGTTTCGGAGGTGGCATCAATTCTCGTGGTAGTTTTATTGAGGTATTGGCAGCAAATCAAACACTCGGTGAATCGGGAAATAAGTGGTTTCAGGGTACTGCCGATGCTGTAAGACAATTCCTTTGGTTGCTTGAGGATGCTGAGCATAAAAACATAGAGAACATTCTGATATTGTGTGGTGATCAGCTCTATCGAATGGATTACATGGAACTTGTGCAGAAACACATTAATTCATGTGCTGATATATCTGTATCTTGTCTACCGGTGGATGGCAGTCGTGCCTCTGATTTTGGATTAGTGAAGGTTGATGAAAAAGGACAGATACGCCAGTTCATGGAAAAACCGAAGGGAGAATTATTAAGATCTATGCGTGTCGATACGAGTGTTTTTGGGTTATCAGCTCAGGAAGCAAGAAAATCTCCATATATTGCATCAATGGGTATATATGTGTTTAAATTAGATGTGCTTCTCAAACTTCTCAGGAACTATTATCCTAATGCAAATGATTTTGGATCTGAGGTCATTCCAATGGCTACAAAAGATTTTAAAGTCCAGGCATGTCTTTTCAGTGGTTATTGGGAAGATATTGGGACTATAAAATCTTTCTTTGATGCAAACTTGGCTCTTATGGACAAGCCGCCGAAATTTCAGTTATATGATCAGTCAAAGCCTATTTTTACATGTCCTCGGTTCCTACCCCCGACAAAATTGGAGAAATGTCAGGTGATTAATTCTTTGATTTCGGACGGTTGCTTTTTAAGAGAGTGCAGGGTTGAACATTCCATTGTGGGAATTCGCTCGAGATTTGATTCTGGAGTCCAGCTCAAGGATACCATGATGATGGGAGCTGACTATTACCAAACCGAGGCTGAAATAGTGGCTCTTTTAGCAGCGGGAAATGTTCCTATAGGCATAGGCAGGAATACAAAAATCATGAACTGTATAATTGACAAAAATGCAAGAATTGGAAACAATGTAATAATTGCAAACAAAGAAAATGTGCAAGAGGCTGACAGACCCTCAGAGGGGTTTTATATTCGATCAGGAATCACGGTGGTGTTAAAAAACTCAGTAATAAACAATGGCACAATCATTTAA 1356 0.4049 MALQSPILAGLEANPKTVASIILGGGAGTRLFPLTQKRAKPAVPFGGCYRLVDIPMSNCINSGIDKIYVLTQFNSRSLNRHIARTYSFGGGINSRGSFIEVLAANQTLGESGNKWFQGTADAVRQFLWLLEDAEHKNIENILILCGDQLYRMDYMELVQKHINSCADISVSCLPVDGSRASDFGLVKVDEKGQIRQFMEKPKGELLRSMRVDTSVFGLSAQEARKSPYIASMGIYVFKLDVLLKLLRNYYPNANDFGSEVIPMATKDFKVQACLFSGYWEDIGTIKSFFDANLALMDKPPKFQLYDQSKPIFTCPRFLPPTKLEKCQVINSLISDGCFLRECRVEHSIVGIRSRFDSGVQLKDTMMMGADYYQTEAEIVALLAAGNVPIGIGRNTKIMNCIIDKNARIGNNVIIANKENVQEADRPSEGFYIRSGITVVLKNSVINNGTII 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02867 451 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 24 43 IPR005836 GO:0005978|GO:0008878
Car03g02867 451 Pfam Nucleotidyl transferase 20 296 IPR005835 GO:0009058|GO:0016779
Car03g02867 451 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 4, CHLOROPLASTIC/AMYLOPLASTIC 2 451 - -
Car03g02867 451 CDD ADP_Glucose_PP 21 282 - -
Car03g02867 451 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 19 415 IPR011831 GO:0005978|GO:0008878
Car03g02867 451 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 230 240 IPR005836 GO:0005978|GO:0008878
Car03g02867 451 SUPERFAMILY Trimeric LpxA-like enzymes 315 451 IPR011004 -
Car03g02867 451 Gene3D Hexapeptide repeat proteins 317 451 - -
Car03g02867 451 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 9 316 IPR029044 -
Car03g02867 451 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 115 123 IPR005836 GO:0005978|GO:0008878
Car03g02867 451 SUPERFAMILY Nucleotide-diphospho-sugar transferases 18 412 IPR029044 -
Car03g02867 451 CDD LbH_G1P_AT_C 319 445 - -
Car03g02867 451 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 2 451 IPR011831 GO:0005978|GO:0008878
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02867 Car-Chr3 73994438 73999292 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02867 K00975 - gmx:100786313 822.772