Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02858 ATGAAAAGTTTCTTTCTCACCCCCTTATTATTTTGCTTTACTGTTATTTGGTACTCTGCATCTTTGGGAGTTGAAGCATGGATCACATACCCACCAATTGAACCAATCTCTTATCTAATCAGCAAAAAACTTTATGATGCAATTTTCCTACACAAAGATGACACAGCATGTCCTGCCAAAAACTTTTACCCTTATGAATCTTTCATTGAAGCTTCCAAATCCTTCCCTGAATTTGCAACTACTGGTTGTTTGAACACAAGAAAACGTGAGATAGCTGCTTTTCTTGCTCAGATTTCTCATGAAACTACAGGTGGATGGGCCACTGCACCTGATGGACCATATTCTTGGGGGTTATGCTTTAAGGAAGAAATTAGTCCTCAGAGTAATTACTGTGATTCTACTGATAAACATTGGCCTTGTTTCGCAGGCAAAACTTATAAGGGAAGAGGCCCTATTCAACTTTCTTGGAATTTCAACTATGGACCAGCAGGGAAGGCCTTGGGATTCGATGGGCTGAAGAACCCTGAGATTGTGTCCAACAATTCATTGATAGCGTTCAAAACAGCTCTTTGGTTTTGGATGACAGAGAGAAAACCAACACCTTCTTGCCACAATGTTATGGTTGGAAAATATGTGGCAACACAAGCTGACATAGCAGCTAATAGAACAGCTGGTTATGGTTTGGTCACAAACATAGTCAATGGTGGATTGGAATGTGGAATTCCAGATGATGCAAGAGTCAATGATAGAATTGGATTTTTTGAAAGATATGCTAAATTGTTAAATGTGGATACTGGACCTAATTTGGATTGTGCATATCAGAAATCCTTCAAATGA 837 0.3907 MKSFFLTPLLFCFTVIWYSASLGVEAWITYPPIEPISYLISKKLYDAIFLHKDDTACPAKNFYPYESFIEASKSFPEFATTGCLNTRKREIAAFLAQISHETTGGWATAPDGPYSWGLCFKEEISPQSNYCDSTDKHWPCFAGKTYKGRGPIQLSWNFNYGPAGKALGFDGLKNPEIVSNNSLIAFKTALWFWMTERKPTPSCHNVMVGKYVATQADIAANRTAGYGLVTNIVNGGLECGIPDDARVNDRIGFFERYAKLLNVDTGPNLDCAYQKSFK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02858 278 Pfam Chitinase class I 39 271 IPR000726 GO:0004568|GO:0006032|GO:0016998
Car03g02858 278 Gene3D - 43 277 - -
Car03g02858 278 PANTHER CHITINASE-RELATED 32 277 - -
Car03g02858 278 PANTHER OS05G0138200 PROTEIN 32 277 - -
Car03g02858 278 CDD chitinase_GH19 40 271 - -
Car03g02858 278 PIRSF Endochitinase 10 278 IPR016283 GO:0004568|GO:0005975
Car03g02858 278 ProSitePatterns Chitinases family 19 signature 2. 184 194 IPR000726 GO:0004568|GO:0006032|GO:0016998
Car03g02858 278 Gene3D Endochitinase, domain 2 122 180 - -
Car03g02858 278 SUPERFAMILY Lysozyme-like 36 277 IPR023346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02858 Car-Chr3 73927779 73929650 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02858 35 277 Glycoside Hydrolase AT4G01700 72.840 1.86e-143 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02858 - - gmx:100784196 476.478