Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02842 ATGGATTCACCGAATGAATCAATGGCGGTGATGGAACAACAACGCTTAACTGAATGGCGTGTGCACCGTGGTCCTTACCTTGGAGACATCTCAGCTCTCTGTTTTCTTCATCTTCCCAATCAATCTCTTCCTCTTCTACTTGCCGGTTTAGGTTCGGAAATTATGTTATACGACTTAGAACTTGGAAAAATTATTAAATCCTTTTCGGTTTTCGAAGGGATTCGCGTCCACGGTATCACTTCTAGTTCTGAACATGTCATTGCTGTGTTTGGAGAAAAAAGAGTTAAACTATTTAGCATCTCATTTGAAAATAATGATTATGAGATGCCACATTTAATGCTGATTCATTTGTTGCCGAAATTTGGTCACTGGGTTTTGGATGTTTGCTTCCTCAAGGGATGTTTACCTTGTTCGAATGTGGAGAGCGATTTTCTTGCTATAGGATGTAGTGATAATTCAGTTCAAATATGGGACATTTCCAACTCTAATATGGTTGTAAAGGTTCAATCACCAGTACGATGCCTTCTGTACTCAATGCGATTATGGGGTCATGATCTTGAAGTTCTCCGAATTGCCTCCGGTACAATATTTAATGAGATTGTTGTTTGGAAAGTGGCCCCTCAACATGACAAATCTTCAAGAACTCAAGAAGACCATGACCATCAGGGCTCCAATTGCAGCTCACTAAAAGGTAATCTGTATGAGGCTGTTCACATTTGTAAACTTGTTGGACATGAAGGTTCAATCTTCCGAATAACATGGTCGTCTTGTGGCTCTAAACTGGTATCTGTTTCTGATGACCGTAGCGCACGTGTCTGGTCTCTTCCTATTGGAAAGGAAGATTCACTGTACCATGATCCCATTGCCCTTGTTTTGTTTGGACATAATGCTCGAGTTTGGGACTGCTGTATTTCCGATCATTTTATTGTCACTGTCAGTGAGGATTGTACATGTCGTATATGGGGAATTGATGGTGAACAGCTGCAAGTCATTAGGGAGCACATTGGAAGGGGTATATGGAGATGTTTGTATGACCCAAATTTGTCACTTCTTATAACTGCTGGGTTTGACTCTGCTATCAAGGTGCATCGGCCTCATGCTTGTCTGTCCAGGGGCTTGGCAGAAGAACAATTGTCCCCCGGAAGTACAGAGATGTTTTCCATTTCCATCCCTAATGTGTTGGAACATATTGGATTGACGGACAGCAAGAGTGAGTACGTTCGTTGTTTGCGTTTTTCCTCTCAGGATTCTCTTTATGTTGCTACCAATCATGGTTATCTCTACCATGCTAAATTATGTGAGGCTGGAGGGGATCAGTGGAATCAGCTTGTCCAGGTCAGCAACGGGGCACCAATTATCTGTATGGATTTTTTGTCCAAGGACTCATTTGAACTTGGATGTGGTGATGAGGATTGGATTGCCATTGGAGATGGTAAAGGAAATATGACAGTTATAGGAGTTACTAACAATGATTGTACTCCTACAGTTACATTGAGCTTTACTTGGCGAGCTGAAATGGAGAGACAGCTCTTGGGTACTTATTGGTGCAAATCTTTGGGATGTAGGTATGTCTTTACAGCGGACCCTAGAGGAGGATTGAAACTGTGGAGGTTGCCCGACCCTTCACAGTCTAATAGTCAGAGCTCCCCGAGCAGTCACATTGTGTCACTTGCAGCGGAGTTCATATCAAGTTATGGAATGCGGATAATGTGTTTGGATGCATGCACGGGGGAAGAGGTCCTAGCATGTGGAGATCTACGTGGTAATATGGTTTTGTTTCCTTTGCTAAAGAGTTTGGTGCTGAGCACATCTGTTGGACAAGAGATGAAAATACCCCCAGTAAATCATTTTAAAGGAGTACATGGGATTTCAAGTGTCTCCAGCGTTGTTGTGACTAAACTTGGTTACAATCAAATTGAGATACGCTCAACTGGAGCAGATGGTTGTATATGCTATCTAGAATATGATAAAGAAATGCAGAATTTGCAATTTACGGGGATGAAACAAGTGAAAGAATTGACTTTGATTGAGCATGTCTCTGTTGATAACAACTCGGAAGGTACAACATCCAGAAGCTATGCAGCAGGTTTTGCATCTGTAGATTTTATAGTATGGAACTTAGTCAATGAGAATAAGGTAGTGAAAATTCCATGTGGTGGCTGGCGCCGTCCTCATTCCTATTTTCTAGGTGATGTACCAGAGATGAAGAACTGTTTTGCCTTTGTTAAGGATGAAATGATACATATACATAGACTCTGGATTGATGATAAAGATGCTAAAATATACCCTCTGAGTTTACATATGCAATTTCATGGGAGAGAGATACATTCCTTGTGCTTTATACATGAAGATATGCTTCTTGGAGATAATTATAAGCGTCCATTATTTTCTAATTCAAGTTGGATTGCAACTGGATGCGAAGATGGGACTGTGAGATTGACTTGGTACTCTCCAGGTATTGAGAATTGGTCCATGTCAAAATTGCTAGGTGAGCATGTTGGAGGATCAGCTGTAAGATCAATTTGTTGCGTCTCAAAACTACACACCATTCCATCAGCTACAACCGATGTACCAGATCGGAGGAGTGAACTAGATGCTGCTGACGAGGATGAAGATAATCCAACCTTACTGATATCAGTGGGTGCAAAGCGTGTCTTAACTTCTTGGCTACTTAAACATAGGAGGCTGAACAACAAAATTGACTACATAACTGATAATCAGCAAAATTCAAAAGAAGTTCACGATCAATTTTTGTCAAGGTTGTCGTCTTCAATGACGTTCCAGTGGCTATCCACTGACATGCCAACCAAATATTCAACTACACACAGATATGCAGATAATAATGTGAGGAAAGTAGCTGCTGTCGCTGAAAATGTTTCTAATATAAAAATTGATGCTGAACCTGGATCACTGATTTCTGAAAGGGAAACAGTGAACTTGGTCAGAGATAAACATGAGGATGACTGGAGATATCTTGCAGTCACTGCTTTTCTTGTTAAATGTGCTGGTTCCAGGATATCtgtctgttttgttgttgttgcttgttCAGATGCTACAGTTATGTTACGGGCTTTAATTTTGCCCTTTCGCTTATGGTTTGACATTGCATTACTTGTCCCTTCATTGGCACCTGTTTTGGTATTGCAGCATATCATCTTTCCCATACTTAAGCCTTGTAAAGATAACACCCATGTTGGAAATGCTTACATTGTGATTAGTGGATCTACTGATGGGAGTGTTACATTTTGGGACCTGACTGACAGTGTTGAAGCTTTTATGCAGAGAGTTTCAGTTTGTGATATAGAGAAGCTTTTTGATTGTCAAAAGCGTCCACGCACAGGGAGAGGAAGCCAGGGTGGTAGACGGTGGAGATCGTGGAGATCTTTAGACAATGGCTTATGTAAAAAAGGACAAGATAATGATCTGGTGACTTCAAAAGCCAAAAACAAGACCGAAAACATAAATTATACTGCACATGGGCCCTATTCAATGCCAAATAAATCTGAAGACAGCAATATTGTTTGTTTTCAGGCCATGCATACAGCTTCCCCTGAGTTAGAAATTAGGAATGATAATTCGTCGATGGAAATATGTGAAATACAGCCTCTACGCCTTTTGAAGAATGTTCACCAATCTGGTGTCAACTGTCTCCATGTTTCAGAGATAAATGGTGGGCAAAATAATGATAATTGTCATCTGTACAGCATAATTAGTGGGGGTGATGATCAATCACTTCATCATCTTGTGGTTGAGTTATCACCTAAAACAATAAATCTTGGTGATGGGATTTTAACCCCAGATATAACAACACATTTGGTCCCTGAACCTGAATATGCAAAGGACGACAACTTTCAAAATCAGAGTAGAACCTACAAGATCAGATTCTTAAATTCCCAAAAGTTTCCTTCGGCCCACAGCTCTTCAGTGAAAGGTGTCTGGACCGACGGATCTTGGGTGTTTTCGACTGGACTTGATCAGCGGGTCAGATGCTGGTATCTTCACCAAAGTAAACTAATTGAACGAGCACACCTAATAGTTAGTGTTCCGGAGCCAGAAGCGTTATCTGCTAGGGCTTGTAGCAGGAACCATTATCAGATTGCTGTTGCTGGAAGAGGGATGCAAATAGTGGACTTCTCCGCATGCTAA 4146 0.4086 MDSPNESMAVMEQQRLTEWRVHRGPYLGDISALCFLHLPNQSLPLLLAGLGSEIMLYDLELGKIIKSFSVFEGIRVHGITSSSEHVIAVFGEKRVKLFSISFENNDYEMPHLMLIHLLPKFGHWVLDVCFLKGCLPCSNVESDFLAIGCSDNSVQIWDISNSNMVVKVQSPVRCLLYSMRLWGHDLEVLRIASGTIFNEIVVWKVAPQHDKSSRTQEDHDHQGSNCSSLKGNLYEAVHICKLVGHEGSIFRITWSSCGSKLVSVSDDRSARVWSLPIGKEDSLYHDPIALVLFGHNARVWDCCISDHFIVTVSEDCTCRIWGIDGEQLQVIREHIGRGIWRCLYDPNLSLLITAGFDSAIKVHRPHACLSRGLAEEQLSPGSTEMFSISIPNVLEHIGLTDSKSEYVRCLRFSSQDSLYVATNHGYLYHAKLCEAGGDQWNQLVQVSNGAPIICMDFLSKDSFELGCGDEDWIAIGDGKGNMTVIGVTNNDCTPTVTLSFTWRAEMERQLLGTYWCKSLGCRYVFTADPRGGLKLWRLPDPSQSNSQSSPSSHIVSLAAEFISSYGMRIMCLDACTGEEVLACGDLRGNMVLFPLLKSLVLSTSVGQEMKIPPVNHFKGVHGISSVSSVVVTKLGYNQIEIRSTGADGCICYLEYDKEMQNLQFTGMKQVKELTLIEHVSVDNNSEGTTSRSYAAGFASVDFIVWNLVNENKVVKIPCGGWRRPHSYFLGDVPEMKNCFAFVKDEMIHIHRLWIDDKDAKIYPLSLHMQFHGREIHSLCFIHEDMLLGDNYKRPLFSNSSWIATGCEDGTVRLTWYSPGIENWSMSKLLGEHVGGSAVRSICCVSKLHTIPSATTDVPDRRSELDAADEDEDNPTLLISVGAKRVLTSWLLKHRRLNNKIDYITDNQQNSKEVHDQFLSRLSSSMTFQWLSTDMPTKYSTTHRYADNNVRKVAAVAENVSNIKIDAEPGSLISERETVNLVRDKHEDDWRYLAVTAFLVKCAGSRISVCFVVVACSDATVMLRALILPFRLWFDIALLVPSLAPVLVLQHIIFPILKPCKDNTHVGNAYIVISGSTDGSVTFWDLTDSVEAFMQRVSVCDIEKLFDCQKRPRTGRGSQGGRRWRSWRSLDNGLCKKGQDNDLVTSKAKNKTENINYTAHGPYSMPNKSEDSNIVCFQAMHTASPELEIRNDNSSMEICEIQPLRLLKNVHQSGVNCLHVSEINGGQNNDNCHLYSIISGGDDQSLHHLVVELSPKTINLGDGILTPDITTHLVPEPEYAKDDNFQNQSRTYKIRFLNSQKFPSAHSSSVKGVWTDGSWVFSTGLDQRVRCWYLHQSKLIERAHLIVSVPEPEALSARACSRNHYQIAVAGRGMQIVDFSAC 1381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02842 1381 Gene3D - 282 367 IPR015943 GO:0005515
Car03g02842 1381 Gene3D - 374 895 IPR015943 GO:0005515
Car03g02842 1381 SUPERFAMILY WD40 repeat-like 28 216 IPR036322 GO:0005515
Car03g02842 1381 SUPERFAMILY WD40 repeat-like 142 538 IPR036322 GO:0005515
Car03g02842 1381 SMART WD40_4 324 364 IPR001680 GO:0005515
Car03g02842 1381 SMART WD40_4 111 158 IPR001680 GO:0005515
Car03g02842 1381 SMART WD40_4 1199 1249 IPR001680 GO:0005515
Car03g02842 1381 SMART WD40_4 235 274 IPR001680 GO:0005515
Car03g02842 1381 SMART WD40_4 1294 1332 IPR001680 GO:0005515
Car03g02842 1381 SMART WD40_4 1045 1084 IPR001680 GO:0005515
Car03g02842 1381 SMART WD40_4 285 322 IPR001680 GO:0005515
Car03g02842 1381 SMART WD40_4 763 815 IPR001680 GO:0005515
Car03g02842 1381 Gene3D - 1009 1376 IPR015943 GO:0005515
Car03g02842 1381 Pfam WD domain, G-beta repeat 770 813 IPR001680 GO:0005515
Car03g02842 1381 Pfam WD domain, G-beta repeat 241 274 IPR001680 GO:0005515
Car03g02842 1381 Gene3D - 233 281 IPR015943 GO:0005515
Car03g02842 1381 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 242 275 - -
Car03g02842 1381 ProSiteProfiles Trp-Asp (WD) repeats profile. 1071 1093 IPR001680 GO:0005515
Car03g02842 1381 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 403 1342 IPR011047 -
Car03g02842 1381 ProSiteProfiles Trp-Asp (WD) repeats profile. 242 275 IPR001680 GO:0005515
Car03g02842 1381 Gene3D - 7 232 IPR015943 GO:0005515
Car03g02842 1381 PANTHER WD REPEAT PROTEIN 13 1379 - -
Car03g02842 1381 ProSiteProfiles Trp-Asp (WD) repeats profile. 141 167 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02842 K24737 - gmx:100780968 2123.21