Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02821 ATGGAAGATTTAGGGTCTAACCGTTTTGATGGTATAACCACTGCTGTGAGAAGGAAGAGAAGCCAAACTTCTCGTCGGCCGCGGCCTGATTCGCAGCCTGTTCCTGATCCTGAATTTCATGATGAACTGACTCCATCATCATCAACACCTCCTTCAGAGGATGTTGATAAGGTCACTAGTGATGAGAATGTTGGTTATGATAATGACAATAATACAAAAAGAAAAGAATTTAATCTGAATCAGTGTGTTACTCATACTTCTTCTGTTGTTGGAGCAGAAGAAGATGATGATGATAAATTGCTTAGAAGAAAAAGTAAAAAAGATGGAGGGTTCCATGGATTTTACAATAGTGAGTCTGGACGTAGTGGTTTGTACAATAGACGTAGTAGCGAAGGTGTTCTTGCTCCTGCGAATTGGAAAGGTTCGAGTAAGGTTAAGGATGGTTTGGATTCGGAGTCAAAAAATGCTGATATCTACGTTGGAAGGAATTCTGAGAGTATGAGTTTAGGGCAGTTTGGTGTTTCTCAGGATGGATTGGGGAATGAGAATAGGGTTAAGAAGGTTAAACTCAAGGTTGGTGGTGTGACGCGTACTATACAAGCTAACTCTGCTTCTAATAGTGCATCGGGAAGTGGATCGAATTCAAAAAGCTCTCGGTTATCGGATGCCTCCAGACCGCGCCAAAAGCAACAGAGTAATTCAGACGATAATAATTCTCCATCTGATAAGAGGAGCGGCCTCCAAGGCCTTCCGTGGAAGGATTTCTCAAGGGGTGGTTTTGGTCTTGGGAAGGGGGAGTCATCGATGGGGAAGATATCCGGAAAGAACACATCTAGCAAGCAAGGAGACAAGTCTGAACCTGTTCGTAAGAGCAAGAGAGTACCCAAGAGACGAGTGCTGGATGGGGAATTCGGtgatgacgatgatgctgatgatgagatTCGCTACTTGGAAAAGCTGAAAACATCAAAAGTTTCTGCAGTCTACAGAGACGAAGAAGAATTAAGCAAGAAACATCGAAGACTCTCTAGCGTCTCTAATATGGACAATGCAGCCTCATCAAGGTCGGGCAAAGACGGTAAGAAAAGGTCTAGATCTGATAGGCTGTATGAGGATACAGATTATGACGATGAAGAGGAATCAGGGTCTGATGGAGAGCTTGAGGATAAGAAAAAGAAAAAGCAGAGGAAGGAATCTGTTGATGTGTTGATGGACAGTAAGAGGGAAATGACTCTTACAACGCGTCAACGAGCCCTTCAATCAAGCAAAGATGCATCTGCATCTAGTACGAGTTTAATTGAGTTTCCCAACGGATTGCCTCCAGCCCCACCTAGAAAGCAAAAAGAGAAGCCTACGGAAGAGGAGCTGCTATCAAAGAAAACTGAGGCTGCCAATAGGCGTAAAGTGCAAGTTGAGAAGGCTGCTAGGGAATCCGAGGCTGAAGCTATCAGAAAAATACTTGGTCAAGACTCCACCAGGAAAAAGAGAGAGGATAAAATAAAGAAGCGCCAAGAAGAACTGGCACAGGAGAGGGCAGCCAATGCACAAAGGCTTGCAGCAAATACCATCAGATATGTGACGGGTCCCACTGGGACAATTGTGACTTTTCCTGAGGAAATGGGGCTCCCTGCGATTTTTAACTCCAAACCTGTCAGCTATCCTCCACCTCGCGAGTTGTGTGTTGGTCCATCATGTACGAATCCATATAAGTACCGGGATTCAAAAACCAAGGTTCCTCTTTGCAGTCTCGAATGCTACAAGGCTGTCCACGAGAAGACTGCTGATGAAACTGCTGTACAGGAGAAGACTTCTGATGAAACTGCTGTCCAGGAGAAGACTACTGATGAAACTGCCAGATGA 1860 0.4392 MEDLGSNRFDGITTAVRRKRSQTSRRPRPDSQPVPDPEFHDELTPSSSTPPSEDVDKVTSDENVGYDNDNNTKRKEFNLNQCVTHTSSVVGAEEDDDDKLLRRKSKKDGGFHGFYNSESGRSGLYNRRSSEGVLAPANWKGSSKVKDGLDSESKNADIYVGRNSESMSLGQFGVSQDGLGNENRVKKVKLKVGGVTRTIQANSASNSASGSGSNSKSSRLSDASRPRQKQQSNSDDNNSPSDKRSGLQGLPWKDFSRGGFGLGKGESSMGKISGKNTSSKQGDKSEPVRKSKRVPKRRVLDGEFGDDDDADDEIRYLEKLKTSKVSAVYRDEEELSKKHRRLSSVSNMDNAASSRSGKDGKKRSRSDRLYEDTDYDDEEESGSDGELEDKKKKKQRKESVDVLMDSKREMTLTTRQRALQSSKDASASSTSLIEFPNGLPPAPPRKQKEKPTEEELLSKKTEAANRRKVQVEKAARESEAEAIRKILGQDSTRKKREDKIKKRQEELAQERAANAQRLAANTIRYVTGPTGTIVTFPEEMGLPAIFNSKPVSYPPPRELCVGPSCTNPYKYRDSKTKVPLCSLECYKAVHEKTADETAVQEKTSDETAVQEKTTDETAR 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02821 619 Pfam HIT zinc finger 556 587 IPR007529 -
Car03g02821 619 PANTHER INO80 COMPLEX SUBUNIT B 1 597 IPR029523 GO:0006338|GO:0031011
Car03g02821 619 SMART PAPA_1_2 455 540 IPR006880 GO:0031011
Car03g02821 619 MobiDBLite consensus disorder prediction 1 508 - -
Car03g02821 619 MobiDBLite consensus disorder prediction 196 245 - -
Car03g02821 619 Coils Coil 493 513 - -
Car03g02821 619 MobiDBLite consensus disorder prediction 314 344 - -
Car03g02821 619 Coils Coil 461 481 - -
Car03g02821 619 PANTHER HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN 1 597 - -
Car03g02821 619 MobiDBLite consensus disorder prediction 355 371 - -
Car03g02821 619 MobiDBLite consensus disorder prediction 55 74 - -
Car03g02821 619 MobiDBLite consensus disorder prediction 90 111 - -
Car03g02821 619 MobiDBLite consensus disorder prediction 282 304 - -
Car03g02821 619 MobiDBLite consensus disorder prediction 385 412 - -
Car03g02821 619 MobiDBLite consensus disorder prediction 157 178 - -
Car03g02821 619 MobiDBLite consensus disorder prediction 592 619 - -
Car03g02821 619 Pfam PAPA-1-like conserved region 455 540 IPR006880 GO:0031011
Car03g02821 619 MobiDBLite consensus disorder prediction 446 508 - -
Car03g02821 619 MobiDBLite consensus disorder prediction 413 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02821 Car-Chr3 73598857 73602693 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02821 - - gmx:100814323 800.431