Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02804 ATGGCTCCTTCACTCTCACCTTTCATTGTTCTGTTCATCGTGGTTCTCCTCCAGCGCACATGCGAATCACGTGACACATTCGCGTGCGACCCAAAAGATGGCACAACAAAGAAGTTACCATTTTGCAGTGTGAAGTTGGCGATACCGGAGAGAGTGAAGGATATAATTGGAAGGTTAACGTTGCAAGAGAAAGTTAATTTGTTAGTTAATAATGCTGCGGCGGTTCCGAGATTTGGAATAAAAGGCTATGAGTGGTGGTCTGAGGCACTTCATGGTGTTTCAAATGTGGGTCCTGGAACTAAATTTGGTGCTCTCTTTCCCGGTGCTACTAGTTTCCCTCAAGTCATCACCACCGCTGCTTCTTTCAATGCGTCTTTGTGGGAGGCTATTGGACGGGTTGTCTCGGACGAAGCAAGGGCAATGTACAATGGAGGAGCAGCAGGGTTAACTTATTGGAGTCCAAATGTGAACATTTTCAGAGATCCTAGGTGGGGTCGTGGACAGGAAACTCCCGGTGAGGACCCTGTGCTAGCCGGTAGTTATGCTGCTAGTTATGTTAAGGGGCTACAGGGAACAGACGGTAACCGGTTGAAGGTGGCTGCTTGTTGCAAACACTTCACAGCTTATGATATTGATAATTGGAACGGCGTGGATCGCTTTCACTTTAATGCACAGGTGAGTAAGCAGGACATAGAGGACACATTCGATGTGCCATTCAGAATGTGTGTGAAGGAAGGAAAAGTAGCAAGTGTCATGTGTTCTTACAATCAAGTCAATGGTGTCCCTACTTGTGCTGACCCCAACCTCCTAAAGAAAACTGTTCGTGGACAATGGGGACTTGATGGGTACATTGTATCTGATTGTGACTCTGTTGGAGTATTTTACAATAGCCAACATTATACATCAACACCAGAAGAAGCTGCTGCTGATGCAATCAAAGCAGGTTTGGATTTAGATTGTGGGCCTTTCCTAGGAATACACACGCAAGATGCAGTGAAAAAAGGTTTGGTAACTGAATCAGATGTAAATGGTGCTTTGGTGAATACATTAACGGTGCAAATGAGATTAGGGATGTTTGATGGAGAGCCATCGGCTCAAGCTTACGGCAAGTTAGGTCCAAAAGATGTGTGTAAGCCGGCTCACCAAGAGCTAGCCCTTGAAGCCGCTAGACAAGGAATTGTGCTTCTTAAAAACACTGGTCCCACTTTGCCTCTCTCTACACAGCATCACCGAACTGTGGCTATAATTGGGCCTAATTCTAATGTCACTGTTACCATGATTGGAAATTATGCAGGTATTGCATGTGGATATACAAGTCCCTTAGAAGGAATAGGAAGATATGCTCGAACAATTCATCAACCTGGTTGTGTAAATGTAGCTTGTAAAGACGATAAGAATTTTGGGCCTGCCTTAGATGCAGCCCGTCAAGCAGATGCAACAGTTCTAGTGATAGGCTTGGACCAATCTATTGAAGCTGAAACCATTGATAGGACCGGCTTGCTTTTGCCTGGGCATCAGCAAGATCTTGTTTCAAAAGTTGCAGCTGCATCAAAGGGACCAACTATATTGGTCTTGATGTCTGGTGGGCCTATAGACATTACTTTTGCGAAGAATGATCCTCGAATTGCTGGTATCTTGTGGGCCGGATATCCGGGCCAAGCTGGTGGTGCTGCCATTGCTGATATTTTATTTGGAACCGCTAACCCAGGAGGCAAGCTACCTGTGACATGGTACCCACAAGAGTACCTAAAAAACTTGGCCATGACAAATATGGCAATGAGAGCAAGCTCAATAGGGTACCCCGGAAGAACATACAGATTCTATAAAGGACCGGTAGTATATCCATTTGGACACGGATTGACATACACACACTTTGTTCAAACATTATCTAGTGCTCCCACATTGGTGTCAGTTCCCGTGCACGGTCACCGACATGGTAACAACACAAACATTTCAAACAAAGCAATTAGAGTGACCCATGCAAAATGTGGCAAACTTTCCATTACTCTTCATGTTGATGTTAAAAATGTCGGATCTAGAGATGGTACTCACACATTGTTAGTTTTCTCTGCTCCACCTAATGGTGGGGCCCATTGGGTCCCACAGAAACAATTAGTGGCATTTGAGAAAGTTCATGTTGCTGCTAATACTAAGCAAAGAGTTAGATTCAATATTCATGTTTGCAAGTTTCTTAGTGTTGTGGATAGGTCGGGGATTAGGAGAATTCCAATGGGGGAACATAGTCTTCAAATTGGTGACGATGTTAATCATTCTGTTTCACTTCAAGCAGAAGCACTTGGGATTATCAAGTCTTGA 2316 0.4434 MAPSLSPFIVLFIVVLLQRTCESRDTFACDPKDGTTKKLPFCSVKLAIPERVKDIIGRLTLQEKVNLLVNNAAAVPRFGIKGYEWWSEALHGVSNVGPGTKFGALFPGATSFPQVITTAASFNASLWEAIGRVVSDEARAMYNGGAAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGSYAASYVKGLQGTDGNRLKVAACCKHFTAYDIDNWNGVDRFHFNAQVSKQDIEDTFDVPFRMCVKEGKVASVMCSYNQVNGVPTCADPNLLKKTVRGQWGLDGYIVSDCDSVGVFYNSQHYTSTPEEAAADAIKAGLDLDCGPFLGIHTQDAVKKGLVTESDVNGALVNTLTVQMRLGMFDGEPSAQAYGKLGPKDVCKPAHQELALEAARQGIVLLKNTGPTLPLSTQHHRTVAIIGPNSNVTVTMIGNYAGIACGYTSPLEGIGRYARTIHQPGCVNVACKDDKNFGPALDAARQADATVLVIGLDQSIEAETIDRTGLLLPGHQQDLVSKVAAASKGPTILVLMSGGPIDITFAKNDPRIAGILWAGYPGQAGGAAIADILFGTANPGGKLPVTWYPQEYLKNLAMTNMAMRASSIGYPGRTYRFYKGPVVYPFGHGLTYTHFVQTLSSAPTLVSVPVHGHRHGNNTNISNKAIRVTHAKCGKLSITLHVDVKNVGSRDGTHTLLVFSAPPNGGAHWVPQKQLVAFEKVHVAANTKQRVRFNIHVCKFLSVVDRSGIRRIPMGEHSLQIGDDVNHSVSLQAEALGIIKS 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02804 771 Gene3D - 379 623 IPR036881 GO:0004553|GO:0005975
Car03g02804 771 Gene3D Immunoglobulins 646 765 IPR013783 -
Car03g02804 771 Pfam Fibronectin type III-like domain 685 754 IPR026891 -
Car03g02804 771 SMART Fn3_like_2 684 755 IPR026891 -
Car03g02804 771 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 393 625 IPR036881 GO:0004553|GO:0005975
Car03g02804 771 Pfam Glycosyl hydrolase family 3 N terminal domain 106 347 IPR001764 GO:0004553|GO:0005975
Car03g02804 771 SUPERFAMILY (Trans)glycosidases 39 392 IPR017853 -
Car03g02804 771 Pfam Glycosyl hydrolase family 3 C-terminal domain 393 622 IPR002772 GO:0004553|GO:0005975
Car03g02804 771 Gene3D - 51 369 IPR036962 GO:0004553|GO:0005975
Car03g02804 771 PRINTS Glycosyl hydrolase family 3 signature 112 131 IPR001764 GO:0004553|GO:0005975
Car03g02804 771 PRINTS Glycosyl hydrolase family 3 signature 199 215 IPR001764 GO:0004553|GO:0005975
Car03g02804 771 PRINTS Glycosyl hydrolase family 3 signature 273 291 IPR001764 GO:0004553|GO:0005975
Car03g02804 771 PANTHER SUGAR HYDROLASE-RELATED 4 767 IPR044993 GO:0009044|GO:0045493
Car03g02804 771 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 4 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02804 Car-Chr3 73482220 73488979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02804 9 771 Glycoside Hydrolase AT1G02640 73.725 0.0 1188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02804 - - gmx:100789316 1341.25