Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02792 ATGGTGAATACAGCTTCTTCTTCTTCTCCGGTGAAAATAACCGTCTCTTCCGGAGGAAAAGCAGCAGGAAGTAGAAGCATGGGTTTAACAAGTCCACAACCACGCGCTTCAATCTCCAACAACAACACCAATTCCCCTCTATCAAACAGAGCTTCCGGTGGTGGTGGAAGGAGGTTCTCCGGTGGAGGTAACTATTCCTCAATGTCCAAAGAAGATGTTACAGAAGCAACAACCTCAGAATATGTTTCATACACAGTTCACATTCCTCCAACACCAGATCGCATGCCACTCTCAACTTCACAAACAAGCCTTCCTGAAGATCCCAAAAACAACAACAGTTTCATTTCCGGTACAATCTTCTCCGGCGGTTTCAACACCGTGACACGAGGCCACGTCATCGAATTCTCCACTGTTCGCGATGATCAACCGATTAAATCTAAATTGATATGTGGAATGAGAGGCTGTGATGAGGAAGCAATAAAGGGTGTTGGTACATGTGAGTGTGGGTTCAAGATTTGCAGGGATTGTTACAAGGAGTGTTGTGGAAATGGAGGAGGAGGTAAATGTCCAGGTTGTAAAGAACCTTACAACAATGTGAGTgatgatgaagaagaagaagaggaagaggaagaggaagaagagtgtgaagaTCAAGCAAAACCTTTACCTTCAATGGCGGAGTTTAAGATGGACAAGAGGTTATCTCTTGTGAGATCTTTTAAAGCTCAGAATCAGAATCATCCACCGGATTTTGATCATACTCGTTGGCTCTTTGAAACTAAGGGAACTTATGGATATGGAAATGCTGTTTGGCCTAAAGATGAATTTGGTTCCAATGGATATGAATCCCCTTTTGATTTTGAAAATAAATCTCAAAGACCTTTGACCAGAAAAGTTGGGGTCACAGCTGCAATTCTCAGTCCTTATAGGTTGCTAATTCTGCTCCGTCTTGCTGCACTTGGTTTGTTTCTTACATGGAGGGTTCGACACCCGAACCGTGAGGCAATGTGGTTGTGGGGAATGTCAGTGACTTGTGAGTTATGGTTTGCATTTTCGTGGATTCTTGATCAGCTTCCTAAGCTATGTCCAGTGAATAGAAGTACTGATTTGTCTGTTTTGAAAGATCGGTTTGAGTCTCCAAATCTGCGAAATCCGAAAGGGAGATCTGATCTACCTGGAATTGATGTATTTGTTTCAACGGCAGACCCAGAAAAAGAGCCTCCTCTTGTCACTGCAAACACCATTCTCTCTATCCTTGCAGTCGATTATCCTGTGGAAAAAGTTGCTTGTTATTTGTCTGATGATGGTGGAGCTCTTTTGACATTTGAAGCTCTTGCTGAGACTGCTAGTTTTGCAAGAGTTTGGGTTCCTTTCTGCAGAAAGCATCAAATAGAGCCTAGAAATCCTGAAGCTTATTTTGGCCAGAAGCGCGATTTTCTCAAGAACAAGGTTCGGTTGGACTTTGTTAGGGAGAGGAGAAGGGTGAAGAGGGAATATGATGAATTCAAAGTCAGGATAAATTCTTTACCTGAATCTATAAAAAGAAGGTCAGATGCTTACAATGCTCATGAGGAGTTACGAGCAAAGAAGAAACAAATGGAAACAGGTTCAGATGTATCTGAACTCCTCAAGGTTCCTAGAGCAACATGGATGTCTGATGGTTCTCATTGGCCTGGAACTTGGCCATCAGCTGAACCTGATCACTCTAGAGGTGATCATGCTGGTTTAATTCAGGCAATGTTGGCTCCACCAAATGTAGAACCAGAATATGGTTCAGAAGCTGATGGAGAGAACTTAATTGACACAACAGATGTTGATGTTAGGTTGCCAATGCTTGTTTATGTGTCTCGTGAGAAGAGGCCAGGATACGATCACAACAAGAAAGCAGGCGCGATGAATGCTCTTGTTCGAACTAGTGCTATCATGTCCAATGGACCATTCATTCTCAATCTTGACTGTGATCATTACATCTACAACTCTTTGGCTCTCAGGGAAGGTATGTGCTTTATGCTTGACCGGGGTGGTGACAGAATATGTTATGTTCAATTCCCTCAAAGGTTTGAGGGTATTGATCCGAGCGACCGATATGCAAACCACAACACAGTGTTCTTTGATGTGAGCATGAGAGCTCTAGATGGCTTACAAGGGCCAATGTATGTTGGAACTGGCTGCATATTCAGAAGAACGGCTCTTTACGGGTTTAGCCCACCAAGAGCTTCAGAACATCATGGATGGTTTGGCAGGAGGAAAATTAAGTTGTTTTTGAGAAAGCCTAAGGTGTCAAAAAAGGTAGAAGATGAAGTGGCATTGCCAATCAATTGTGATCACAACGACGACGATGCAGATATCGAGTCCTTGCTTCTTCCCAAAAGGTTTGGGAATTCTACTTATCTAGCTGCATCAATTCCAATGGCAGAATACCAAGGAAGATTGCTTCAAGATTCAAAAGGAAAGGGAACACAAGGAAGGCCTGCAGGTTCTCTTGCCGTGCCTCGCGAACCATTAGATGCTGCTACGGTGGCCGAGGCAATTAGTGTCATATCTTGTTTCTATGAGGATAAAACTGAGTGGGGAAAACGAGTCGGGTGGATATATGGTTCAGTTACAGAAGATGTTGTTACTGGTTACAGAATGCACAATAGAGGGTGGAGATCAGTTTACTGTGTGACCAAAAGAGATGCTTTTAGAGGAACAGCACCAATCAATTTAACAGACAGACTCCATCAAGTTCTTCGATGGGCGACAGGTTCGGTCGAGATCTTCTTCTCAAGGAACAATGCATTATTAGCAAGTCCTAGAATGAAATTCTTGCAAAGGGTTGCATATTTCAATGTTGGAATGTACCCTTTCACTTCAATGTTTTTGATTGTGTATTGCTTTCTACCAGCATTATCCTTATTTTCTGGTCAGTTTATAGTCCAATCTCTCAATGTAAATTTTCTAGTGTACTTGCTTGGAATAACAGTCACACTATGCATGCTTGCACTGCTTGAGATCAAATGGTCCAAAATCACTCTACATGATTTGTGGAGAAATGAACAGTTCTGGTTAATTGGTGGAACAAGTGCACACCCTGCTGCTGTTTTACAAGGCTTGTTGAAGGTGATAGCAGGAGTAGACATCTCATTTACACTGACTTCAAAATCAGCAACTCCAGAAGATGGAGATGAAGAGTTTGCTGATCTTTATGAGGTAAAGTGGAGCTTTTTAATGGTACCTCCAATCACAATCATGATGGTGAATGCTATTGCTATTGCTGTGGGTGTAGCTAGGACTCTATATAGTCCATTTCCACAGTGGAGCAAATTAGTAGGAGGGTTGTTTTTCAGCTTCTGGGTGTTATGTCATCTTTACCCTTTTGCAAAGGGACTTATGGGAAGGAGAGGTAAGGTTCCAACCATTATATATGTTTGGTCTGGATTACTCTCAATTATTATTTCTCTGCTTTGGGTTTATGTTAACCCTCCTTCTGGTGCAAAACCACAAGATTACATGAATTTTTAG 3504 0.4164 MVNTASSSSPVKITVSSGGKAAGSRSMGLTSPQPRASISNNNTNSPLSNRASGGGGRRFSGGGNYSSMSKEDVTEATTSEYVSYTVHIPPTPDRMPLSTSQTSLPEDPKNNNSFISGTIFSGGFNTVTRGHVIEFSTVRDDQPIKSKLICGMRGCDEEAIKGVGTCECGFKICRDCYKECCGNGGGGKCPGCKEPYNNVSDDEEEEEEEEEEEECEDQAKPLPSMAEFKMDKRLSLVRSFKAQNQNHPPDFDHTRWLFETKGTYGYGNAVWPKDEFGSNGYESPFDFENKSQRPLTRKVGVTAAILSPYRLLILLRLAALGLFLTWRVRHPNREAMWLWGMSVTCELWFAFSWILDQLPKLCPVNRSTDLSVLKDRFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKVACYLSDDGGALLTFEALAETASFARVWVPFCRKHQIEPRNPEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIKRRSDAYNAHEELRAKKKQMETGSDVSELLKVPRATWMSDGSHWPGTWPSAEPDHSRGDHAGLIQAMLAPPNVEPEYGSEADGENLIDTTDVDVRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRASEHHGWFGRRKIKLFLRKPKVSKKVEDEVALPINCDHNDDDADIESLLLPKRFGNSTYLAASIPMAEYQGRLLQDSKGKGTQGRPAGSLAVPREPLDAATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKFLQRVAYFNVGMYPFTSMFLIVYCFLPALSLFSGQFIVQSLNVNFLVYLLGITVTLCMLALLEIKWSKITLHDLWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDEEFADLYEVKWSFLMVPPITIMMVNAIAIAVGVARTLYSPFPQWSKLVGGLFFSFWVLCHLYPFAKGLMGRRGKVPTIIYVWSGLLSIIISLLWVYVNPPSGAKPQDYMNF 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02792 1167 MobiDBLite consensus disorder prediction 1 72 - -
Car03g02792 1167 SUPERFAMILY RING/U-box 149 197 - -
Car03g02792 1167 MobiDBLite consensus disorder prediction 193 219 - -
Car03g02792 1167 Pfam RING/Ubox like zinc-binding domain 165 197 - -
Car03g02792 1167 SUPERFAMILY Nucleotide-diphospho-sugar transferases 409 961 IPR029044 -
Car03g02792 1167 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 89 1160 - -
Car03g02792 1167 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 598 747 IPR029044 -
Car03g02792 1167 MobiDBLite consensus disorder prediction 1 51 - -
Car03g02792 1167 Coils Coil 196 216 - -
Car03g02792 1167 Pfam Cellulose synthase 394 1160 IPR005150 GO:0016020|GO:0016760|GO:0030244
Car03g02792 1167 MobiDBLite consensus disorder prediction 94 110 - -
Car03g02792 1167 MobiDBLite consensus disorder prediction 86 110 - -
Car03g02792 1167 MobiDBLite consensus disorder prediction 199 217 - -
Car03g02792 1167 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 89 1160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02792 Car-Chr3 73381934 73386194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02792 37 1159 Glycosyltransferase AT3G03050 65.281 0.0 1519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02792 K00770 - gmx:100804687 1994.55