Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02778 ATGAACCCCTCCAAGCCCCCGCGCCGGAAAGTTATTCCGGCGAATGGCGACGACTCCGGAGACAAACTTGACCAACTCCTTCTCTCCTCCGCCATATGCAACAACGAAGACCTAGGTCCCTTCATCCGCAAAGCTTTCGCTTCAGGCAAACCAGAGAGCCTCCAACACCACCTTAAGCACTTCGCTCGTTCCAAAGAATCCGAGATCGAAGAAGTCTGCAAAGCACACTACCAAGACTTCATCCTCGCCGTCGACGACCTCAAATCCCTCCTCTCCGACGTCGAATCCCTCAAGTCATCACTCTCCGATTCCAACTCCAAACTCCAATCCGTCGCTCGTCCTCTCCTTTCCTCCCTCGACTCCTTCGTCGAAACGCGAAACGTTTCGAAGAACGTTAACCTTGCAATCGAATCAGTCGAAGCGTGTGTTCACCTTATGGAAGTTTGCTCCCGCGCTAACCGTCACCTCTCCGGTGACAACTTCTACATGGCGCTCAAGTGCGTTGATACAATCGAGAGAAATTTCTTGGATAAAACGGCGTCGTCGACTTTGAAGAAGATGCTTGAGAAGAAGATTCCAGAGATTCGTTCTTACATAGAGAGAAAAGTGAACAAAGAGTTTGGTGACTGGTTAGTTGAGATCCGTGTTGTGAGTCGCAATTTAGGTCAATTGGCAATTGGTCAAGCTTCATCGGCAAGACAGAGAGAAGAGGATCTCAGAATCAAACAGCGCCAAGCGGAGGAACAGAGTAGGCTCAGTGTTAGGGATTGCATTTATGCTTTGGAGGAAGAGGATGAAGATGCAATCTCTGCGGGAACCGGAGATGACGGTTACGGTAATGGAAACGGTAACGGTGGTGGAGTTTTAGGATTTGATTTGACTCCGTTGTATAAAGCTTATCATATTCATCAGACATTAGGGTTAGAGGATCGGTTTAAGCAATATTATTTTGAGAATCGGAAGCTTCAGTTGACTTCAGATTTTCAGGTATCGTCGATGACGCCTTTTCTTGAATCGCATCAAACGTTTTTTGCACAGATTGCAGGTTTCTTTGTGGTGGAGGATCGTGTTTTAAGGACTGGTGGTGGTTTGATTTCGAAAATGGAAGTTGAGAATCTTTGGGAAATTGCTGTTAGTAAAATGTGTTCTGTGTTGGAGGATCAATTCTCCAGAATGCAAACTGCTAATCATCTTTTATTGATTAAGGATTATGTGAGTTTATTAGGAGTAACATTGCGGAGATTCGGTTATCCAATTGATGCATTGCTTGATGTTTTAAGCAAACACAGGGATAAGTATCATGAATTGCTATTGTCAGATTGTAGGAAGCAGATAGCTGAGGCTGTAGGTGGTGATAAGTTTGAACAGATGTTGATGAAGAAAGAGTATGAGTATTCCATGAATGTGCTTTCTTTTCAGATTCAGACGTCGGATATTGTACCTGCTTTTCCTTATTTAGCACCTTTTTCGTCTACAGTACCGGATTGTTGTCGCATTGTGCGGTCCTTCATTGAGGATTCTGTTAGTTTCATGTCGTATGGCGGGCAGCTTGAGTTTTATGATGTTGTTAAGAAATATTTAGATAAGCTTTTGAGTGAGGTTTTAGATGAAGCTTTATTAAAGCTTATTAATACCTCAGTTAGTGGTGTTTCCCAGGCAATGCAAATGGCAGCAAATATGGCTGTTATGGAGCGTGCATGTGATTTTTTCTTCCGTCATGCGGCTCAGCTTTCAGGGGTTCCCTTGAGAATGGTGGAGAGAAGTAGGAGGCAGTTCCCTCTGAGAAAAGCTCGTGATGCCGCGGAAGAGATGCTGTCTGGGTTGCTCAAAGCCAAAGTTGATGGATTTATGACCTTGATTGAGAATGTGAATTGGATGACGGATGATCCACCTCAAAGTGGAAATGAATATGTAAATGAGGTCATTATTTATTTGGAAATTTTGGTTTCAACTGCATCGCAGATATTGCCAACTCAAGTCCTTAAAAGAGTTCTACAGGATGTTCTTTGTCACATATCGGAGACGATAGTTGGTACTTTAGCTAGTGATTCTGTTAAGAGGTTTAATGTCAGTGCCATTACTGGAATTGATACAGACATCAAGCTCTTAGAATCATTTGCTGAAAATCAGGCTACCCTTTTCTCTGATGGGGATGCTGATCAGTTGAAATCGTCACTTGCCGAATCAAGGCAACTGATTAATTTGCTAGCAAGCAATCATCCTGAGAATTTCCTGAATCCAGTGATCAGGGAGAGGAGTTACAATGCTTTGGACCACAAGAAAGTGGTGATTGTTTCAGAGAAGTTGAAGGATCCTTCGGATCGACTCTTTGGAACCTTTGGTAGTCGAGGGTCTAGGCAGAACCCAAAAAAGAAATCACTGGATACATTGATAAAAAGACTAAGGGATGTTAGTTAA 2418 0.4334 MNPSKPPRRKVIPANGDDSGDKLDQLLLSSAICNNEDLGPFIRKAFASGKPESLQHHLKHFARSKESEIEEVCKAHYQDFILAVDDLKSLLSDVESLKSSLSDSNSKLQSVARPLLSSLDSFVETRNVSKNVNLAIESVEACVHLMEVCSRANRHLSGDNFYMALKCVDTIERNFLDKTASSTLKKMLEKKIPEIRSYIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASSARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEDEDAISAGTGDDGYGNGNGNGGGVLGFDLTPLYKAYHIHQTLGLEDRFKQYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVLRTGGGLISKMEVENLWEIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRFGYPIDALLDVLSKHRDKYHELLLSDCRKQIAEAVGGDKFEQMLMKKEYEYSMNVLSFQIQTSDIVPAFPYLAPFSSTVPDCCRIVRSFIEDSVSFMSYGGQLEFYDVVKKYLDKLLSEVLDEALLKLINTSVSGVSQAMQMAANMAVMERACDFFFRHAAQLSGVPLRMVERSRRQFPLRKARDAAEEMLSGLLKAKVDGFMTLIENVNWMTDDPPQSGNEYVNEVIIYLEILVSTASQILPTQVLKRVLQDVLCHISETIVGTLASDSVKRFNVSAITGIDTDIKLLESFAENQATLFSDGDADQLKSSLAESRQLINLLASNHPENFLNPVIRERSYNALDHKKVVIVSEKLKDPSDRLFGTFGSRGSRQNPKKKSLDTLIKRLRDVS 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02778 805 Gene3D - 419 591 IPR042045 -
Car03g02778 805 Pfam Exocyst complex subunit Sec15-like 465 769 IPR046361 -
Car03g02778 805 Coils Coil 229 249 - -
Car03g02778 805 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 597 744 IPR042044 -
Car03g02778 805 PANTHER EXOCYST COMPLEX COMPONENT SEC15B 7 805 - -
Car03g02778 805 PIRSF Sec15 4 805 IPR007225 GO:0006886|GO:0090522
Car03g02778 805 PANTHER SEC15 7 805 IPR007225 GO:0006886|GO:0090522
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02778 Car-Chr3 73264356 73267093 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02778 K19985 - gmx:100796432 1362.05