Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02765 ATGcttcctctatctcttcttaagactgcacaaggccaccctatgTTGGTGGAGCTGAAAAATGGAGAGACTTATAATGGGCATTTGGTTAATTGCGATACATGGATGAACATCCATCTTCGAGAAGTCATTTGTACCTCTAAAGATGGAGATAGATTTTGGCGGATGCCAGAATGCTATATACGGGGGAATACAATTAAGTATCTTCGAGTTCCCGATGAGGTAATTGACAAAGTTCAAGAAGAAACCAAGAGCCGTACAGATCGCAAGCCACCTGGTGTGGGACGTGGGAGGGGAAGAGGTAGGGAGGACAGTGCTGGTGGACGCCAACCAAAAGGAGTTGGGCGTGGTTTTGATGATGGCAGTGCTAAGGGACCTGGAGGCCGAGGCAGGGGTGGACAAGGTGGAAAGCCTGGTGGAAGTAGAGGTGCTGGTGGGAGAGGTAGAGGTTGA 453 0.4481 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGRGREDSAGGRQPKGVGRGFDDGSAKGPGGRGRGGQGGKPGGSRGAGGRGRG 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02765 150 Pfam LSM domain 6 70 IPR001163 -
Car03g02765 150 Gene3D - 1 83 - -
Car03g02765 150 MobiDBLite consensus disorder prediction 79 150 - -
Car03g02765 150 SUPERFAMILY Sm-like ribonucleoproteins 3 132 IPR010920 -
Car03g02765 150 MobiDBLite consensus disorder prediction 79 109 - -
Car03g02765 150 CDD LSm4 2 77 IPR034101 GO:0000398|GO:0000956
Car03g02765 150 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 138 IPR027141 GO:0006396
Car03g02765 150 SMART Sm3 5 71 IPR001163 -
Car03g02765 150 PANTHER SM-LIKE PROTEIN LSM4 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02765 Car-Chr3 73170141 73174015 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02765 K12623 - ming:122087586 224.172