Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02759 ATGGTGGCAATGGCAGTGGTTGCATCGCAACAATTCATGTGCTTCTCAGAATCAAATTGGAGAATTAGAACAAAACCATGTTTTCCCCTTCCTCATTTCAACACCGTTCTTCTACGCTCACGCAATAAGATTCAATTGCCACTAATTTCATGCTCTTCTTCATCACAGACCCCACAAACTGATACTCAAACTGCTGAATCTTGTGTCAATTTGGGTCTTCAGCTTTTCTCCAAAGGAAGGGTTAAAGATGCTTTGACACAGTTTGAAACAGCGATTACTTTGAATCCCAATCCTGTAGAGGCACAAGCTGCATTCTATAACAAAGCTTGCTGTCATGCATACAGAGGAGAAGGAAAGAAAGCTGCTGATTGTCTCCGCACTGCTTTGAGGGAATACAATCTAAAATTTGGTACAATTCTCAATGATCCAGACTTGGCCTCTTTCAGAGCTTTGCCTGAATTCAAAGAACTACAAGAAGAGGCCGAGCTGGGTGGGCAAGATATTGGCTCCAGTTTTCGAAGAGATCTAAAACTTATCAGTGAAGTTCAAGCACCGTTTCGTGGGATTAGGAGATTCTTTTATGTAGCATTCACAGCAGCTGCAGGAATTTCGTTGTTGTTTACTTTACCGAGGCTATTTGTTGCAATTCAAGGCGGCGATGGCGCTCCTGGTCTCTCCGAAACTGCTGGAAATGCTGCCATTAACATTGGAGGCATTGTTGTTTTTGTGGCATTATTCCTTTGGGAAAATAAAAAAGAGGAGGAACAAATTGCACAAATATCCCGAGATGAGACACTATCAAGGTTGCCTTTGCGTCTCTCAACCAATCGCATAGTTGAACTCGTGCAGCTAAGGGACACAGTTAGACCAGTTATAATAGCTGGGAAAAAAGAAACAGTGACTATGGCTTTGCGAAGAGCAGAGAGATTTCGCACCGATCTTGTTAGACGTGGAGTTTTGTTAGTTCCTGTCATCTGGGGAGAAAGTGGAGAAACCAAATTTGAAAAGAAAGGTTTTGGTCTTCAACCAAAGGCTGCTGAGGCTCTTCCATCCATTGGGGAAGATTTTGAGAAGCGAACGCAGTCTGTAACTGCACAATCAAAACTGAAAGCTGAAGTTAGGTTCAAGGCTGAGGTTGTATCGCCAGCAGAATGGGAACGGTGGATAAGGGATCAGCAGAAGTCTGAAGGAGTTCCAGTTGGAGAAGACGTGTACATAATACTGCGTCTGGATGGTCGGGTTCGAAGATCAGGAAGAGGTATACCTGACTGGGAGCAAATTGCGAAGGAGCTGCCGCCAATGGAAGCGATTTTAAGCAAGCTGGAAAGATGA 1332 0.4384 MVAMAVVASQQFMCFSESNWRIRTKPCFPLPHFNTVLLRSRNKIQLPLISCSSSSQTPQTDTQTAESCVNLGLQLFSKGRVKDALTQFETAITLNPNPVEAQAAFYNKACCHAYRGEGKKAADCLRTALREYNLKFGTILNDPDLASFRALPEFKELQEEAELGGQDIGSSFRRDLKLISEVQAPFRGIRRFFYVAFTAAAGISLLFTLPRLFVAIQGGDGAPGLSETAGNAAINIGGIVVFVALFLWENKKEEEQIAQISRDETLSRLPLRLSTNRIVELVQLRDTVRPVIIAGKKETVTMALRRAERFRTDLVRRGVLLVPVIWGESGETKFEKKGFGLQPKAAEALPSIGEDFEKRTQSVTAQSKLKAEVRFKAEVVSPAEWERWIRDQQKSEGVPVGEDVYIILRLDGRVRRSGRGIPDWEQIAKELPPMEAILSKLER 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02759 443 Pfam Low psii accumulation1 / Rep27 173 250 IPR021883 -
Car03g02759 443 PANTHER PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC 39 443 - -
Car03g02759 443 PANTHER PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC 39 443 - -
Car03g02759 443 SUPERFAMILY TPR-like 59 131 IPR011990 GO:0005515
Car03g02759 443 ProSiteProfiles TPR repeat profile. 65 98 IPR019734 GO:0005515
Car03g02759 443 Gene3D Tetratricopeptide repeat domain 51 150 IPR011990 GO:0005515
Car03g02759 443 SMART tpr_5 102 135 IPR019734 GO:0005515
Car03g02759 443 SMART tpr_5 65 98 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02759 - - gmx:100793204 730.324