Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02754 ATGTCTTctcaacctcaatctccgtcccaccacacccccgtctcttcgccggaatcttgccccaccacaccaccgccacctccgttgctccttcaactttcttttaaccaagatcacgcttgcttctccgccgctacagataacggcttccgcatcttcaactgcgaccctttccgtgaactcttccgccgtgagtttgatggcggaggaatcgcccacgtggagatgcTTTTCCGTTGCAACATATTGGCACTTGTTGGCGGTGGAACTCAGCCTCAGTACCCTCCCAACAAAGTCATGATATGGGACGATCACCAAGGGAGGTGCATCGGTGAACTTTCTTTCCGAGCCGCCGTTCGCGGCGTTCGACTCCGGCGGGATCGAATTATCGTCGTTGTGGAACAGAAGATATTCGTTTACAACTTCGTTGACCTAAAGCTGTTGCATCAAATTGAAACAATCGCGAACCCTAAGGGGCTATGTGCAGTTTCACACTTGTCTGATTCTCTTGTTCTTGCTTGCCCTGGTTTGCATAAGGGTCAGATTCGCGTCGAAAACTTTGCGCAGAAGAAGACAAAGTTTATTTCTGCTCATGATTCAAGAATAGGTTGTTTCGCTCTCACACTTGATGGACGGATAATTGCCACCGCCAGCGTCAGGGGTACGCTGATTCGGATTTATGATACGGATCATGGCACACTACTTCAGGAAGTAAGAAGGGGTGCCAATGCAGCTGAGATATTTAGTTTGGCATTTTCTTCTACTGCTCAGTGGCTAGCAGTTTCAAGTGACAAGGGTACTGTCCATGTTTTTAGCCTTAAGGTTAATTCCGGTGTCTCTGAGCATGAAAAGTCTCAAAGTTCATCGAGTTCAGATGCAGCGGTTGCCCCGTCTAGCTCATCTCGTTCCTTCATTAAATTTAAAGGAGTGTTGCCCAAGTATTTCAATTCAGAGTGGTCAGTGGCTCGGTTTCACTTACATGAGGGCACCCAGTACACAGTTGCATTTGGTCTCGAAAAGAATACAGTCATAATTCTTGGCATGGATGGAAGTTTCTATAGATGCCAATTCCATCCAGCACATGGAGGTGAAATGACCCAGTTGGAATATCAGAACTTTTTAAAGCCAGGAACAGCCTTGTGA 1143 0.3675 MSSQPQSPSHHTPVSSPESCPTTPPPPPLLLQLSFNQDHACFSAATDNGFRIFNCDPFRELFRREFDGGGIAHVEMLFRCNILALVGGGTQPQYPPNKVMIWDDHQGRCIGELSFRAAVRGVRLRRDRIIVVVEQKIFVYNFVDLKLLHQIETIANPKGLCAVSHLSDSLVLACPGLHKGQIRVENFAQKKTKFISAHDSRIGCFALTLDGRIIATASVRGTLIRIYDTDHGTLLQEVRRGANAAEIFSLAFSSTAQWLAVSSDKGTVHVFSLKVNSGVSEHEKSQSSSSSDAAVAPSSSSRSFIKFKGVLPKYFNSEWSVARFHLHEGTQYTVAFGLEKNTVIILGMDGSFYRCQFHPAHGGEMTQLEYQNFLKPGTAL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02754 380 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 1 379 - -
Car03g02754 380 Pfam WD domain, G-beta repeat 241 271 IPR001680 GO:0005515
Car03g02754 380 SMART WD40_4 188 228 IPR001680 GO:0005515
Car03g02754 380 SMART WD40_4 231 272 IPR001680 GO:0005515
Car03g02754 380 Gene3D - 3 353 IPR015943 GO:0005515
Car03g02754 380 MobiDBLite consensus disorder prediction 1 17 - -
Car03g02754 380 MobiDBLite consensus disorder prediction 1 28 - -
Car03g02754 380 SUPERFAMILY WD40 repeat-like 24 352 IPR036322 GO:0005515
Car03g02754 380 PANTHER WD REPEAT PHOSPHOINOSITIDE-INTERACTING-LIKE PROTEIN 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02754 Car-Chr3 73120579 73123264 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02754 K22991 - gmx:100781692 598.201