Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02744 ATGAACAGCTTAACGGCGAACTTCACAGCTCGAATATGTGGCACACGCCGTGACGTAGTCCCTGTACGACACCGTTCCATTCACCAATTCATTAACAGACGCGTCACTGTTGTTCCCAGAACCACGCTCATTTCTACAAGATTCGTCTGCATGGCGGAACCTTATCTTATATCGAAGCTTGAATCTGCTGAGAAAACTTGGAAAGAATTAACGGTGAAGCTTGCTGATCCAGACATTGTGTCTAATCCCAGTGAGTATCAAAAGTTAGCACAATCGGTATCGGAGCTTGATGTGGTTGTGTCCATGTATAAGAGATTTAAAGACTGTGAGAAGATGCTTGAAGAAACCAAAGCTTTAGCAAAGGATGCTGGCAATGACGAGGATATGGCGGAAATGATATCTTACGAAATTGACTCTTTGTCCAAGCAACTCTCAGAGCTAGAGGACAATATGAAGGTTTTACTGCTTCCCAGTGATCCTCTGGATGCAAGAAACATAATGCTTGAAGTAAGAGCAGGTACCGGTGGTGATGAGGCTGGAATATGGGCTGGTGATCTTGTCCGAATGTATGAAAAATATAGTGAACGTAGTTCTTGGAAGCATTCTGCCATCTCATGCTCTGAGGCAGAAAAAGGAGGATACAAAACTTATGTGATGGAGATCAAAGGAAATCGTGTCTACAGTAAATTAAAATACGAGTCTGGTGTTCACCGAGTTCAACGCGTTCCATTGACAGAAACACAGGGTCGCGTACATACTTCTACTGCAACAGTGGCCATCATGCCAGAGGCTGATGAAGTTGAAGTCGTAATTGATCCAAAAGATATTGAACTGACGACGGCACGTTCTGGGGGTGCTGGAGGCCAGAATGTTAACAAGGTTGAAACAGCAATTGATCTTGTTCATAAACCAACGGGAATCCGCATATTTTGTACTGAAGAAAGGACTCAGATTCAGAACAAGAATCGTGCTTTTCAGTTACTGCGAGCCAAACTATATGAGATAAAGTTAAGGGAGCAGCAAGAGTCAATACGAAATCAAAGAAAACTACAGGTTGGTACAGGAGCACGTGCAGAAAAAATCCGGACATACAATTATAAGGACAATAGGGTTACTGACCACAGATTGAAGAAGAACTATGAACTCACCAATTTTCTGAATGGTGACATAGAGGATGCTGTTCAGTCTTGTGTCTCGATGGAACAAAAGGAGCTTATGGAAGAACTTTCAGAATCTATGGGTGCTCATGCTAGATGA 1257 0.428 MNSLTANFTARICGTRRDVVPVRHRSIHQFINRRVTVVPRTTLISTRFVCMAEPYLISKLESAEKTWKELTVKLADPDIVSNPSEYQKLAQSVSELDVVVSMYKRFKDCEKMLEETKALAKDAGNDEDMAEMISYEIDSLSKQLSELEDNMKVLLLPSDPLDARNIMLEVRAGTGGDEAGIWAGDLVRMYEKYSERSSWKHSAISCSEAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLVHKPTGIRIFCTEERTQIQNKNRAFQLLRAKLYEIKLREQQESIRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRLKKNYELTNFLNGDIEDAVQSCVSMEQKELMEELSESMGAHAR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02744 418 TIGRFAM prfA: peptide chain release factor 1 52 411 IPR004373 GO:0006415|GO:0016149
Car03g02744 418 Pfam RF-1 domain 265 375 IPR000352 GO:0003747|GO:0006415
Car03g02744 418 Gene3D - 162 271 - -
Car03g02744 418 Coils Coil 130 150 - -
Car03g02744 418 Gene3D - 50 160 - -
Car03g02744 418 Gene3D - 329 412 - -
Car03g02744 418 PANTHER LD18447P 8 416 - -
Car03g02744 418 Pfam PCRF domain 64 258 IPR005139 GO:0006415
Car03g02744 418 PANTHER PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTIC 8 416 - -
Car03g02744 418 SUPERFAMILY Release factor 65 406 IPR045853 -
Car03g02744 418 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 282 298 IPR000352 GO:0003747|GO:0006415
Car03g02744 418 Gene3D - 272 328 - -
Car03g02744 418 Hamap Peptide chain release factor 1 [prfA]. 56 410 IPR004373 GO:0006415|GO:0016149
Car03g02744 418 SMART PCRF_a_2 118 233 IPR005139 GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02744 Car-Chr3 73001685 73007769 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02744 K02835 - gmx:100777225 710.294