Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02734 ATGGGAAGCAATTCAAAGTTGAGTGTGGATGGAGTTGAGAATGTGGAGATGGAAAGTGGGAAGAGGAGTGTATATGATGTGTTGTTGAGGTGTGTTGGTCTGTTGCTAACACTAACAGCTACAGTTATGGTTGGTGTTGGAAAACAAACTAAGGTCATTTCCTATGCAGATTTTCAGTTCAAAGCAACTGCTAAGTGGGAATACATGTCTGCTACGGTGTTTTTGTTGGTTGCAAACGCTATAGGATGTTCATACGCAGCAATATCTCTGGTGGTTTCAACAATGGCAAGAAGCAATGGAAATAAAATGAAACTATTTATGATAACAGTGTTAGACCTTATTATCGTGGCATTGTTGTTCTCAGCCAATGGAGCAGCTTCTGCAGTTGGAGTAATAGGAATGAAGGGAAACTCGCACGTGCAATGGATGAAAGTGTGCAATGTATTTGATGCCTATTGTCATTACATGACTGTTTCAGTCGTCTTCTCTTTCATTGCCTCCACGGTTTTCCTTTTGCTTGTGGTTCACTCTCTTTTCGAACTCCATTACAAATCAAACTAA 561 0.4029 MGSNSKLSVDGVENVEMESGKRSVYDVLLRCVGLLLTLTATVMVGVGKQTKVISYADFQFKATAKWEYMSATVFLLVANAIGCSYAAISLVVSTMARSNGNKMKLFMITVLDLIIVALLFSANGAASAVGVIGMKGNSHVQWMKVCNVFDAYCHYMTVSVVFSFIASTVFLLLVVHSLFELHYKSN 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02734 186 PANTHER CASP-LIKE PROTEIN 1E1 15 186 - -
Car03g02734 186 Pfam Casparian strip membrane protein domain 21 168 IPR006702 -
Car03g02734 186 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 15 186 - -
Car03g02734 186 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 28 180 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02734 Car-Chr3 72945826 72947873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02734 - - var:108328473 222.246