Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02727 ATGACTAAAACTCAACCTTCATCGGCACCTGGTGATGAAGTCGAAGATGCAAATGAAGATGAGAAGTATCAGGAAACTGAGCTCTTTGAGGATACTTTAGTGCTCGACAGTCACTTCACAGAAACTGATGTGGAAATGCTCAATCTGAATACTGAGATTGTAGAGGATTCAGAGCCTATAGAGAACATGATAACTGATACAACATGTGAGGATGAACCAGAAGTAGTGCTTGACAGTGAGGATGAAGAAATGAATTGTACAGGCAAAGTGAATGTTGCTAAAGGATTTCTTGAGGATAAAAGTAGTCCAGTAGTGAACAATTATTCGGTGCTATCGAAGAAGAGATTGTTTAGGTTACCATATGAGCAAGCAAACTCAACTGCCACAACTTCTGTGAAATCTTGTACTGGGCATAAAGGAGCTGCAATTGATGCTGAGAGCTTTGATGGCAACAACCATCAATATCTACCAGCTAGGTTATATCGTGCTCACTCGCCAGAGCCCGAGGATTCAATCGAAGATGCACTAGGCTTCGTGGATAGGTACTTGTCGTCGAACAATGTGGACATGTTTCAAGCAGTTCAAAATGGAAAGATCACTATGGAGAAATCACCTCATGTCTCCAGTGCAAAAGGAATATTAAGTCTTTTGTCTAAAAAAACTAAAGCCCGAACTCAAATTGAAGATAAAGACCCTTTCAAATGGGTTGGCAGTGATCAAAATGAAAAAGAAGCTGAAATTTTCTGTAAAAAAGTAAATGCATCTTCCAATTTTGGAAACCATGGACTGACATATAAGAGAAGAAGACAAGAAAAAGGCAGTCATATACAGAACAACGGAAACTGCAGTGCAAGTAATAGATGTGATGAGAGTTCAGTCCAAGAACCAAGATCGGCAGCTGACAATAAAAACTTTCTCAAGGAGTTGGATATTGAGTCATGTGCCACAAGGGAAGATGTTAAAACTTATTCCAGTGTAGCGTGTCTAGAAGACATGTCTGATATTGGCTTGGACACTCAAATAGCTGTTGAAGCTATGGATGCCTTAGCCCGTCTGCCCCCTAATGGCTTTCATTTCAATGATACCCACCAACCCGAGAATACATTTGATGGATCTTTGAGTGACTTGGAACAAAATCATCAGAAAGATTCTTTATGCAAAGAGAGTCCAGGTTTACATTCTATTGCGCTTAAATCATATAAGAGAAATGTATCTTCTTATAGATATAGCAAAGTAACTTCTAGTTCCTATGGCAAGCACACTAACAATCAGAAGTCAGATCCTGTCTCCGGGAGACTGAAAAAAAAAATTGGAAGCAAGTCAACTGTTGAGGGGCAGTTCAAAAATGATTCTAGTTCGTTAATGTGCAGTAAACATGTATCACTTGAACAGGTTTGCTTACTAGGAGAGGATGTAAGTTTTAAACCTGCTGCCAAAGAAACCAAAAATCAGAATAAGAGCATACGGACAAGAATCAAACATCAACCAAGCCATCCTACCGAGAGGAACAATAACATTGAGGAAGAGGGTATTATTAGAGATAATAGGATGGGAAATTGTTTAGTGGCAGACCCAGTGAATATAAATGTTACGACAAAATGTCTTAAATTATCTACTAGTTCATGTGGGGTGGCTACGAAAGGCATGTTGAACCATCAGGTTCAAGTTAATCCACAGCTATCGGCAACCAGCAGTTTTTCGAAGATATATTCTTGGACTTATCCAAAAGGACCAAGAGGGAAAAGAAAGCGAGCTAATGCCCGAAGAATTTTCTGTATTGATAATAAAGAAAGCAATTTCTACTCGGCTAGAAGTCTGGAGGTCCGAGATGTTGTGCATAAATCTTGTCTTCCCCCAGTTTCATCTGGTGATGCTATAAAATTTCAAAACCTGCATAATACGCATCCCTTGTTGCTTGCACATGTTAAATTAATTTCAGACAAGAGTGTTGCACAATCAAGTTCAGAAATTTCAGCTTCAGTTGCTCCAAGTGAAGGCATACAAAATTCAAACGCTAACCATAAGTACAATGAACACTGCAAAAAGGCATGTGAGAAAAACCTGCGGAAGTCTTCACTTTTAAAGGAACTTATCAGATTAGGAGTTCCCAAGTCCACATCAGAAATGATGAAAGATATGAGACATCGAAGAGATATGACACATGTTCGAGTTCTGTTTAGTCAACATTTGGATGACAGTGTCCTCAAGCAACAAAAGAAGATATTGGCACGTCTTAATATATCTACTGCGTCAAGCTCAATGGAGGCCACTCATTTCATAGCAGACAGATTTACACGGACCAAGAATATGCTGGAAACAATGGCTCTTGGGAAATTAGTACTGACACACTTATGGCTTGAAAGTTGTGGACAAGCCAACTGTTTTATTGGTGAGAAAAATTACATTTTGAGGGATATGAAAAAGGAAAAGGAAATAGGCTTTAGCATGCCAGTTTCTCTTGCTCGAGCAAGACAGAAGCCACTCCTAAAGGGTAAAAGAGTCTACATCACCCCACACATCAAACCTGATAAGGAAGTGGTTGCAGGCTTGGTTACAGCTGTTCATGGCCAGCTAGTGGATGAAAATCAGATATTCGCAGACAAGAATGATGATATCTTAGATGATCTATTGATTCTCTCTTGTGAAGAAGACTATGCAATCTGCCGCCATTTCCTTGAGAGAGGAGCTGCTGTTTACAGTTCGGAGGTTGTTCTGAATGGAATTGTAATCCAGAAATTGGAACTCGAGAGGCATAAACTCTTCGCGAATCAAGTTACAAAAAATAAACCAGGTATATATAATCGGTTTGGGAAGGTTTACAGAAGGCGTTTGAGGCCTCTATCTTGA 2847 0.3955 MTKTQPSSAPGDEVEDANEDEKYQETELFEDTLVLDSHFTETDVEMLNLNTEIVEDSEPIENMITDTTCEDEPEVVLDSEDEEMNCTGKVNVAKGFLEDKSSPVVNNYSVLSKKRLFRLPYEQANSTATTSVKSCTGHKGAAIDAESFDGNNHQYLPARLYRAHSPEPEDSIEDALGFVDRYLSSNNVDMFQAVQNGKITMEKSPHVSSAKGILSLLSKKTKARTQIEDKDPFKWVGSDQNEKEAEIFCKKVNASSNFGNHGLTYKRRRQEKGSHIQNNGNCSASNRCDESSVQEPRSAADNKNFLKELDIESCATREDVKTYSSVACLEDMSDIGLDTQIAVEAMDALARLPPNGFHFNDTHQPENTFDGSLSDLEQNHQKDSLCKESPGLHSIALKSYKRNVSSYRYSKVTSSSYGKHTNNQKSDPVSGRLKKKIGSKSTVEGQFKNDSSSLMCSKHVSLEQVCLLGEDVSFKPAAKETKNQNKSIRTRIKHQPSHPTERNNNIEEEGIIRDNRMGNCLVADPVNINVTTKCLKLSTSSCGVATKGMLNHQVQVNPQLSATSSFSKIYSWTYPKGPRGKRKRANARRIFCIDNKESNFYSARSLEVRDVVHKSCLPPVSSGDAIKFQNLHNTHPLLLAHVKLISDKSVAQSSSEISASVAPSEGIQNSNANHKYNEHCKKACEKNLRKSSLLKELIRLGVPKSTSEMMKDMRHRRDMTHVRVLFSQHLDDSVLKQQKKILARLNISTASSSMEATHFIADRFTRTKNMLETMALGKLVLTHLWLESCGQANCFIGEKNYILRDMKKEKEIGFSMPVSLARARQKPLLKGKRVYITPHIKPDKEVVAGLVTAVHGQLVDENQIFADKNDDILDDLLILSCEEDYAICRHFLERGAAVYSSEVVLNGIVIQKLELERHKLFANQVTKNKPGIYNRFGKVYRRRLRPLS 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02727 948 MobiDBLite consensus disorder prediction 412 444 - -
Car03g02727 948 MobiDBLite consensus disorder prediction 270 299 - -
Car03g02727 948 CDD BRCT_PAXIP1_rpt6_like 828 914 - -
Car03g02727 948 PANTHER BRCT DOMAIN-CONTAINING PROTEIN-RELATED 7 928 - -
Car03g02727 948 SUPERFAMILY BRCT domain 707 819 IPR036420 -
Car03g02727 948 MobiDBLite consensus disorder prediction 1 23 - -
Car03g02727 948 MobiDBLite consensus disorder prediction 275 299 - -
Car03g02727 948 MobiDBLite consensus disorder prediction 412 428 - -
Car03g02727 948 Gene3D BRCT domain 708 826 IPR036420 -
Car03g02727 948 CDD BRCT_MDC1_rpt1 722 796 - -
Car03g02727 948 ProSiteProfiles BRCT domain profile. 740 803 IPR001357 -
Car03g02727 948 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 7 928 - -
Car03g02727 948 Gene3D BRCT domain 827 928 IPR036420 -
Car03g02727 948 MobiDBLite consensus disorder prediction 478 503 - -
Car03g02727 948 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 710 802 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02727 Car-Chr3 72902165 72907148 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02727 - K14972 gmx:102659913 1099.35