Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02713 ATGGCGGTTTCCGAAGAAGAATGTTCTTCTGTCAAGCCAGGTCATTCTTCTTCATCCTCTACTTCGCGCTATTATCTATCTAAGTGCGTCCTCAGAGGAAGCGCGGTTCTCCAGGTTCTCTACGCTCACATTCGTTCTCCATTCTCAAACGACGTCGTTTTCGGCAAGGAAACCTCTATAGAGTTGGTAGTGATTGATGAAGATGGGAATGTACAATCTGTTTGTGATCAGCCTGTTTTTGGCACCATTAAAGATCTTGCTGTATTGCCTTGGAATGAGAAATTTTGTGCCCGTGATCCACAAACTCGAGGTAAAGACCTCTTGGTCGCTCTATCTGATTCCGGAAAGCTGTCGTTGCTCACATTTTGCAATGAAATGAACAGGTTTTTTCCTATAACACATGTTCAACTATCTAATCCTGGAAACACAAGGGATCTTCCTGGAAGAATGTTGGCAGTTGACTCCAGTGGTTGTTATATTGCTGCCAGTGCATATGAAGATCGGCTGGCTCTGTTTTCTATGTCAATGACCGGCAGTGATATCATTGATGAGAGAATAATATATCCCTCTGAAAGTGAAGGGACTGCAAGTACTTCCAGAACCACACAGAAAACCAGTATAAGTGGCACTATTTGGAGTATGTGCTTTATTTCACTAGATTCCAGACAATCAATCGTGGAGCATAATCCTCTATTAGCTATTATTCTTAACAGGAGGGGAGCTCTTCTAAATGAATTGCTATTATTGGAATGGAGTGTTAAAGCACGTACAATCTCTGTAATTTCTCAGTATGTTGAAGACGGGCCTCTAGCACATAACATTGTTGAAGTTCCTAACTCTACGGGACTTGCATTTTTATTCAGGGCTGGTGATGTACTGTTAATGGATTTTAGAGATCCTCACAACCCATTATGTGTCAACAGGACTAGCTTGAACATTTTACCCAATGCAATAGAAGAGCAGACTTATATAGACGACTCTTGTAAATTACAAGATCTTGACGATGAAGGCTTTAGTGTTGTTGCCTGTGCTTTGTTGCAGCTTAGTGATGTTGCTCCTATGTGTATAGACAGTGACAATAACGGTACTAATTCAGGTCCCCAGTACATATGTTCTTGGAGTTGGGAACCTGAAAGTTATGAAGTTCCTAGGATGATATTTTGTGTAGACACTGGAGAATTTTTTATGATTGAAGTTTTTTTTGATTCCGATGGCCCTAAATTCAGTCTCTCTGAGTGTCTTTATAAAGGTCTACCTTGTAAAGAACTTTTGTGGGTTAATGGTGGATATGTAGCTGCTATTGTTGAAATGGGGGACGGCATGGTCCTAAAATTGAAAGATGGAAGGTTATGCTTTACAAATCATATTCAAAACATTGCACCAATCTTCGATGTAGCAGATGGGGATTATCATGATGAGAAGCATGACCAAATGTTTGCTTGCTGTGGTGTGACACCTGAGGGGTCAATAAGGATTATTCAAAGTGGTATCAATGTAGAAAAGCTACTTAGGACCCCTTCTACATATGAAGGGGTTGCTGGTACTTGGACTGTCCGGATGAAAATTACCGATTTATATCATTCTTTTCTAGTTCTATCATTTCTTGGGGAGACCAGAATATTGTCAGTTGGCTTAAGTTTTACTGATGTGACTGATTCTGTTGGTTTCCAACCTAATGTGTGTACTTTGGCATGTGGCCTTGTAAGTGACGGTTTGATTGTTCAGATCTACCAATCTACTGTTAAACTCTGTTTGCCTACTAAGGCTGGTCATTCTGAAGGTATCCCTCTGTCCTCTCCTATTTGCACCTCTTGGTCCCCAGACAATCTGCATATTAGTTTGGGGGCAGTTGGGCATAATTTCATAGTTGTGTCAACCTCTAACCCATGCTTTTTGTTTATCCTTGGGGTTAGAATGCTATCAGCTTATCAATATGAAATTTATGAAATGCAACATTTGGGACTGCAGAACGAGTTATCATGCATTTCCATCCCTAGACCAAAGTATGGGATAAAACAATCATATTCATCGATTTCAGAAAATAATAGCTGCACCACCTCTTCTCTATGTGGAGTGGACATCAATAAAACATTTGTTATTGGCACCCACAGGCCTTCGGTAGAAATTTGGTCTTTTGCTCCGGAAGGAGGAGTCACAGTAGTTGCTTGTGGGACAATTTCATTAACAAGTACAATGGGGACTGCTAAAAGTTTTTGTATACCTCAAGATGTACGACTAGTATTTGTTGATAAGTATTATGTTCTTGCTGGATTGAGGAATGGAATGCTCCTTCGCTTTGAGTGGCCAACAGAACCGACTTGTATAAATGTGGTTGACACTGCTTTATCTTCTATAAATTTGGTAAATTCTTTGACCAAGTCTTTCGATATGAGAAATGACCTTCCTTCGATGCTTCAATTGATTGCCATTCGTCGCATTGGCATTACTCCAGTTTTCTTGGTGCCCCTGGATGACACACTTGATGCTGATATAATTGCACTGAGTGATAGGCCTTGGTTGTTGCATAGTGCACGACACAGCCTTTCCTATACTTCTATCTCATTTCAACCATCTTCACATGCAACACCTGTTTGCTCTATTGACTGTCCAAAAGGAATACTATTTGTTGCAGAAAACAGCTTACATCTGGTGGAGATGGTTCACAGCAAGAGACTTAATATGCGGAAATTTCATTTAGAGGGCACTCCACGGAAGGTCCTGTATCACAATGAAAGTCGGACGTTACTTGTGATGAGGACTGAACTGAATTATGGTACATGTTTGTCCGACATATGTTGTGTGGATCCCCTAAGTGGGTCAGTGCTATCGTCTTTTAGACTAGAACTTGGAGAAACTGGAACGTCCATGGAATTAATTAGGTTTGGAAGTGAGCGGGTGCTTGTGGTTGGAACTAGTCTGTCTTCTGGTCCACCCGTAATGCCCAGCGGTGAAGCTGAGAGTGCCAAGGGTCGTCTTCTTGTTATCTGCCTTGAACACGTGCAAAATTCAGATAGTGGTTCAATGATCTACTGTTCGAAGGCAGGGTCAACATCTCAAAAAACTTCACCTTTCAATGAAATTGTTGGGTATGCTCCTGAACAACAATCAAGCAGTAGCCTTGGCAGCAGCCCGGATGATAATAGTTCTGATGGCATCAAACTTGATGATAATGAAATGTGGCAGTTCCGATTGGCTTATGCAACTACATGGCCGGGAATTGTACATGCGATCTGTCCTTATCTTGATCGCTACTTTTTGGCATCTGCTGGCAATGCTTTTTATGTCTGTGGTTTCCCAAATGACACTCCGCATAGAGTGAGACGGTATGCCGTGGGAAGGACGCGTTTCATGATAAGCTCTTTGACTGCATATTTTAGTAGAATTGCAGTTGGTGATCTTCGTGATGGTATCATTTTCTTTTCTTACCACGAGGAAGCAAGAAAATTGGAGCAACTTTACGGTGATCCATCATGTAGGCTAGTTGCTGATTGCATTCTCATGGATGACCATACGGCTATTGTTTCAGATCGTAAAGGAAGCATAGCTGTTTTATGTTCAGATCATTTGGAAGATTGTGCAAGTGCAGAACGCAATTTAAAACTAAGCTGTGCTTATTTCATGGCTGAGATAGCTGTGAGCATTCGAAAGGGCTCCTATTCATACAGACTTCCAGCTGATGATGTTTTGTCAGGTGGCATTGGCCCCAAGACAAATGTTGACTCACTACAAAATACTATTATTGCAAGTACTCTGTTAGGAAGCATAATGATCTTCATTCCTTTATCAAGGGAAGAATATGAACTCTTAGAAGCTGTGCAAGCAAGGCTTGTTGTCCATCATTTGACTGCGCCTATTCTTGGAAATGATCATAATGAGTTTCGGAGCCGTGAAAATCCAGTTGGAATACCCAAGATACTTGATGGGGACATGTTGACTCAGTTTCTCGAGCTGACAAATATGCAGCAAAATGCCATTTTGTCTTCAGAACCACCTGATATGGTAAAACAAAGTTTGAAGCCACTCCTACCTCGATTTTCTGTCAATCAAGTCGTTCAACTTCTTGAACGAGTTCACTATGCACTGAACTAA 4089 0.4121 MAVSEEECSSVKPGHSSSSSTSRYYLSKCVLRGSAVLQVLYAHIRSPFSNDVVFGKETSIELVVIDEDGNVQSVCDQPVFGTIKDLAVLPWNEKFCARDPQTRGKDLLVALSDSGKLSLLTFCNEMNRFFPITHVQLSNPGNTRDLPGRMLAVDSSGCYIAASAYEDRLALFSMSMTGSDIIDERIIYPSESEGTASTSRTTQKTSISGTIWSMCFISLDSRQSIVEHNPLLAIILNRRGALLNELLLLEWSVKARTISVISQYVEDGPLAHNIVEVPNSTGLAFLFRAGDVLLMDFRDPHNPLCVNRTSLNILPNAIEEQTYIDDSCKLQDLDDEGFSVVACALLQLSDVAPMCIDSDNNGTNSGPQYICSWSWEPESYEVPRMIFCVDTGEFFMIEVFFDSDGPKFSLSECLYKGLPCKELLWVNGGYVAAIVEMGDGMVLKLKDGRLCFTNHIQNIAPIFDVADGDYHDEKHDQMFACCGVTPEGSIRIIQSGINVEKLLRTPSTYEGVAGTWTVRMKITDLYHSFLVLSFLGETRILSVGLSFTDVTDSVGFQPNVCTLACGLVSDGLIVQIYQSTVKLCLPTKAGHSEGIPLSSPICTSWSPDNLHISLGAVGHNFIVVSTSNPCFLFILGVRMLSAYQYEIYEMQHLGLQNELSCISIPRPKYGIKQSYSSISENNSCTTSSLCGVDINKTFVIGTHRPSVEIWSFAPEGGVTVVACGTISLTSTMGTAKSFCIPQDVRLVFVDKYYVLAGLRNGMLLRFEWPTEPTCINVVDTALSSINLVNSLTKSFDMRNDLPSMLQLIAIRRIGITPVFLVPLDDTLDADIIALSDRPWLLHSARHSLSYTSISFQPSSHATPVCSIDCPKGILFVAENSLHLVEMVHSKRLNMRKFHLEGTPRKVLYHNESRTLLVMRTELNYGTCLSDICCVDPLSGSVLSSFRLELGETGTSMELIRFGSERVLVVGTSLSSGPPVMPSGEAESAKGRLLVICLEHVQNSDSGSMIYCSKAGSTSQKTSPFNEIVGYAPEQQSSSSLGSSPDDNSSDGIKLDDNEMWQFRLAYATTWPGIVHAICPYLDRYFLASAGNAFYVCGFPNDTPHRVRRYAVGRTRFMISSLTAYFSRIAVGDLRDGIIFFSYHEEARKLEQLYGDPSCRLVADCILMDDHTAIVSDRKGSIAVLCSDHLEDCASAERNLKLSCAYFMAEIAVSIRKGSYSYRLPADDVLSGGIGPKTNVDSLQNTIIASTLLGSIMIFIPLSREEYELLEAVQARLVVHHLTAPILGNDHNEFRSRENPVGIPKILDGDMLTQFLELTNMQQNAILSSEPPDMVKQSLKPLLPRFSVNQVVQLLERVHYALN 1362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02713 1362 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 106 664 IPR018846 -
Car03g02713 1362 MobiDBLite consensus disorder prediction 1 21 - -
Car03g02713 1362 Gene3D - 35 456 IPR015943 GO:0005515
Car03g02713 1362 Pfam CPSF A subunit region 1059 1316 IPR004871 GO:0003676|GO:0005634
Car03g02713 1362 Gene3D - 497 891 IPR015943 GO:0005515
Car03g02713 1362 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 19 1359 - -
Car03g02713 1362 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR (CPSF) A SUBUNIT PROTEIN 19 1359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02713 Car-Chr3 72791243 72804865 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02713 K12830 - gmx:100806799 2179.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02713 03 72791243 72804865 Car03g02713 03 72791243 72804865 ECH