Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02711 ATGCGGAGACCAAGAAATATGAGACCAAATATCGTTTCTGAGGCAGGGTTGCCTACTAGGTTGAATCAATGGTGGGAAAGTATTCCGTTTCTCACTTCTGCAGTGGTGGTTGTGTGTGGAGTGATTTACTTTGTTTGTCTTTTGGTTGGATATGATTCCTTTAACGAGATATGCCTCTTGCCCTCTGCTGCTATATCCAAATTTCAAGTTTACAGGATTTATACCTCCATTCTTTTCCATGGTTCACTCCTTCATGTTCTCTTCAACATGATGGCTTTAGTTCCCTTGGGCTCTGAGCTAGAGAGGATCATGGGCTCAGTTCGCTTGCTATATGTCATTATTTTGTTGGCTACAAGCAATGCTATATTCCATGTTCTCATAGCATTGCTGGTGGCACACAATCCTTTTCTTACAAATGATTATTTCATGAATGAGTGTTCTATCGGGTTCTCAGGAGTTCTATTTTCGATGGTTGTTATAGAGACAAGCCTTAGTGGAGTTCAATCGAGGAGTGTGTTTGGGTTGTTTAATGTGCCTGCAAAGTGGTATGCATTTTTTTTGTTGGTAGTGTTCCAGCTCCTCATGCAAAATGTATCACTACTTGGACACCTTTGTGGCATTATATCTGGGTTTGCATATACATTTGGCTTGTTTAATCTCCTCATACCTGGGACATCCTTTTATTCTTCAATTGAAGCCTCCTCCTGGCTTTCATCATGTGTGAGACGTCCTAAATTTATTGTTTGCACTGGCGGGAATCCCTCGGGTTATATCCCTACACATACAAGCCAAAATTCAACCACTAGTGGACTACTTTCCGGTAATATTTGGGGGAACCTATCATCATTGATGCCTCGAAGGGAAGTGTCTGCTCAGCCTCAGTCAGTTGAGGACAGTAGGTTCCCTGGGAGGGGAAGGACACTTGGTGCTGCTCAAGGTCAAATTGCTTCTGGTCTTAACTCAGATTCAAATCTTCAAGCTAGACTTTTGGAGGATAGTAGTCCCAATCATCCTTCAGATTCAGCCATTCTGAATACTACTCAACGGTTACCGGAAGGAAGGCATTCAGTCGGTAATGCAGCTACAGCAGGAGCAGGCATTCCACATCATCAGGGTGCAGTTGTTTCAGAAGAAGAGATTAAGAAACTTGTATCAATGGGCTTTGATAGGACACAAGTGGAAGTGGCATTGGCGGCTGCTGACGGAGATCTTAACGTGGCAGTGGAAATACTCATGAGCCAGCAGGGTTAA 1251 0.4333 MRRPRNMRPNIVSEAGLPTRLNQWWESIPFLTSAVVVVCGVIYFVCLLVGYDSFNEICLLPSAAISKFQVYRIYTSILFHGSLLHVLFNMMALVPLGSELERIMGSVRLLYVIILLATSNAIFHVLIALLVAHNPFLTNDYFMNECSIGFSGVLFSMVVIETSLSGVQSRSVFGLFNVPAKWYAFFLLVVFQLLMQNVSLLGHLCGIISGFAYTFGLFNLLIPGTSFYSSIEASSWLSSCVRRPKFIVCTGGNPSGYIPTHTSQNSTTSGLLSGNIWGNLSSLMPRREVSAQPQSVEDSRFPGRGRTLGAAQGQIASGLNSDSNLQARLLEDSSPNHPSDSAILNTTQRLPEGRHSVGNAATAGAGIPHHQGAVVSEEEIKKLVSMGFDRTQVEVALAAADGDLNVAVEILMSQQG 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02711 416 Gene3D - 349 416 - -
Car03g02711 416 PANTHER RHOMBOID-LIKE PROTEIN 15 10 415 - -
Car03g02711 416 Pfam Rhomboid family 66 218 IPR022764 GO:0004252|GO:0016021
Car03g02711 416 SMART uba_6 376 413 IPR015940 -
Car03g02711 416 CDD UBA_At3g58460_like 377 412 - -
Car03g02711 416 Gene3D - 22 219 IPR035952 -
Car03g02711 416 SMART DUF1751_2 61 163 - -
Car03g02711 416 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 374 414 IPR015940 -
Car03g02711 416 Pfam UBA/TS-N domain 376 411 IPR015940 -
Car03g02711 416 PANTHER DER1-LIKE PROTEIN, DERLIN 10 415 - -
Car03g02711 416 SUPERFAMILY Rhomboid-like 26 219 IPR035952 -
Car03g02711 416 SUPERFAMILY UBA-like 369 415 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02711 Car-Chr3 72768159 72775162 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02711 - - gmx:100798661 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02711 03 72768159 72775162 Car03g02711 03 72768159 72775162 ECH