Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02705 ATGGCAATAAAATCCAGCAATCTCTTAACCACAAAGCCATCACCACTAACAGCAATGGTAACACTCCTAATCCTGTTCATCCTAGCTTTCTACACCCTCCATTTCCCACACCCTTCCCTCTCAAACAAAACAACCTTCCAAAACATCTTCCTTTCATCTTCTTCCAACTCCACTATATCCACCTACCTCCGCACCCTCACCATGCACCCTCACCTCGCTGGAACTAAACCCAATTCCAAAACCGCAACTTTCCTCCTCAACCACTTCTCTTCCTTAAACCTCCCTTCTCACACAACTTCTTACAAAACTCTTCTCTCTTATCCATTGCACTCTTCCCTCACCGCGCATTTTAGCAACCATTCATCTCCCCTCAACCTTCCACTAACCGAACCATCCGCTCCATCCGTGGTTCATGCTTACCACGCTTATTCACCATCCGGTTCAGTTTTTGCCAAACCGGTGTTCGTTAACTACGGAAGAGACATCGACTATCGTGCGCTTGGGGTGGACGTTAAGGGGTGTATAGTGATCTTACGAAAAGGTGGAAACTTGGGGCGTAGCGCAATGATTGAGAAGGCTGAGGCAAATGGGGCAGTGGCGGTGTTAATCTACAACGACGAAGGTGACACGTGGCGTAATGGTTTTGAGAGAGGTCACGTGATGAAGGGTGTGGGGGACCCACTCAGTCCTGGTTGGGGTAGTAGTGTTGATGGAAGTGAGAGGTTGAGTTTGGAAGATAATGAGGTTTTGAAAAGGTTTCCCAAAATTCCTTCCATGCCACTCTCTGCTGAGGTTGCTGATACTGTTTTGTCTTCACTTGGTGGTTCTCCGGTGCCCTTAGACTGGAGGGATGCCTTCAATTCTAAGGTTACACATGTTGGTCCTGGTCCCACTATGCTCAATTTCACCTACCTGGGTGAAATGAAGGTGGCCACCATTCAAAATGTTTTTGCTGTCATAAAAGGATCAGAAGAACCTGATCGCCATGTTCTGCTTGGGAACCATAGAGATGCATGGACTTATGGTGCTGTTGATCCCAGCAGCGGGACAGCTGCCCTACTTGACCTTGCTCGACGATTCTCTATTCTACTCAGTTCAGGGTGGAAGCCAAGGAGGACAATCATTCTATGCAGTTGGGATGCAGAGGAATTTGGCATGATAGGATCCACCGAATGGGTTGAACAAAACCTTATCAATCTTGGTTCCAAAGCTGTAGCATATCTGAATGTGGACTGTGCTGTTCAAGGCCCTGGTTTCTTTGTTGGCTCAACTCCTCAGCTAGACAGTCTTATTCTTGAGGTCATAAAAAAGGTGAAGGATCCCGACTCCGAGGGTGTGTCAGTATATGATACATGGGCTGCTGCCGCTGGAGGAAATAATATTCAGAGGCTCGGTAGAGTTGATTCTGATTTCGCTCCGTTTGTGCAACATGCAGGGGTTCCATCTGTAGATGTGTATTATGGAAAAGATTTTCCCGTTTATCACACTGCTTTCGACTCCTATAACTGGATGGCAGAGTATGGAGATCCATTCTTCCAACGCCATGTTGCTGTTACTGGAATTTGGGGCCTTCTAGCCCTTCGCCTGGCTGATGACTCCATTCTTCCTTTCGATTACTTGTCATATGCAAATGAGTTACAGTTATACAGAGATATTTTGAGCAACATGTTAGACCAGAAAATTTCTGTGCACCCATTAACGTCGTCAATTGAAGAATTTGCTTCTGCTGCCAAAGAAGTTGATGATGAATTAAAGGAACTTAGATTGCTGGAAACTGCAGGTCAGTTTGTAGATATGAAAAGACGAGCGATGAACGATAGACTAATGCTTGCAGAAAAAGGTTTCCTAGATGGAGACGGACTTGAAGGAAAACAGTGGTTCAAGCATCTTGTGTTTGGGCCTCCCAATGACCCTGAGAAGTTAGATTTCTTCCCTGGGATTGCTGATTCTATAACTAGGTCAGCTAGCACAGGTGAAAGAGAACGGCTGGCAGAAATTCAACATGAGATCTGGAGGGTTGCTAGAGCCATTCAAAGAGCTACTTCTGCACTTAGAGGAGAATTCACCTAA 2070 0.4594 MAIKSSNLLTTKPSPLTAMVTLLILFILAFYTLHFPHPSLSNKTTFQNIFLSSSSNSTISTYLRTLTMHPHLAGTKPNSKTATFLLNHFSSLNLPSHTTSYKTLLSYPLHSSLTAHFSNHSSPLNLPLTEPSAPSVVHAYHAYSPSGSVFAKPVFVNYGRDIDYRALGVDVKGCIVILRKGGNLGRSAMIEKAEANGAVAVLIYNDEGDTWRNGFERGHVMKGVGDPLSPGWGSSVDGSERLSLEDNEVLKRFPKIPSMPLSAEVADTVLSSLGGSPVPLDWRDAFNSKVTHVGPGPTMLNFTYLGEMKVATIQNVFAVIKGSEEPDRHVLLGNHRDAWTYGAVDPSSGTAALLDLARRFSILLSSGWKPRRTIILCSWDAEEFGMIGSTEWVEQNLINLGSKAVAYLNVDCAVQGPGFFVGSTPQLDSLILEVIKKVKDPDSEGVSVYDTWAAAAGGNNIQRLGRVDSDFAPFVQHAGVPSVDVYYGKDFPVYHTAFDSYNWMAEYGDPFFQRHVAVTGIWGLLALRLADDSILPFDYLSYANELQLYRDILSNMLDQKISVHPLTSSIEEFASAAKEVDDELKELRLLETAGQFVDMKRRAMNDRLMLAEKGFLDGDGLEGKQWFKHLVFGPPNDPEKLDFFPGIADSITRSASTGERERLAEIQHEIWRVARAIQRATSALRGEFT 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02705 689 PANTHER F10A2.10 PROTEIN-RELATED 19 689 - -
Car03g02705 689 CDD M28_PSMA_like 311 537 - -
Car03g02705 689 SUPERFAMILY Zn-dependent exopeptidases 55 534 - -
Car03g02705 689 Pfam Transferrin receptor-like dimerisation domain 561 684 IPR007365 -
Car03g02705 689 SUPERFAMILY Transferrin receptor-like dimerisation domain 536 687 IPR036757 -
Car03g02705 689 Pfam PA domain 154 208 IPR003137 -
Car03g02705 689 Coils Coil 570 590 - -
Car03g02705 689 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 19 689 IPR039373 -
Car03g02705 689 Gene3D Zn peptidases 57 536 - -
Car03g02705 689 SUPERFAMILY PA domain 104 317 IPR046450 -
Car03g02705 689 Gene3D - 539 689 IPR036757 -
Car03g02705 689 Gene3D - 111 306 - -
Car03g02705 689 Pfam Peptidase family M28 315 502 IPR007484 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02705 Car-Chr3 72735252 72740810 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02705 K01301 - gmx:100818733 1061.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02705 03 72735252 72740810 Car03g02705 03 72735252 72740810 ECH