Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02702 ATGAAATTCGGGTACACATTTAAGGAGTACCTGCAGGAGGAGCGGGAATGGTTAGTGGACGAGAATTGTGCACATATTGAATATAACAGGTTGAAAAATGTTTTGAAGAGTTGTCAGAATTGCAAAGATACTTCTTCGGATAAAGACCAGTTATGTCAGTGTCAATCTTGCCCAGTATGCGATCAGAAGTTTTTCTCCGAGCTGATGAAGGAAGCATCAGACATAGCAGGCTACTTTAGTTCAAGAGTTCAGCATCTTCTTCATCTCCATATTGCAAAAGGACTGCAGAGATATGTACTGAGTTTGCGCCAGTGTTTTAAAAATGATCGGCAAGCCCTTGCCCAAGAAGGAAGAATTCTAATTGAGTACATTACCATGAATGCAATTGCAATGAGGAAAATACTTAAGAAATATGATAAAGTGCACAGCTCTATGAATGGGGAGAATTTCAAATCCAAGATGCATGCTGAGCATATTGAACTTTTACACTCACCTTGGCTGATTGAATTGGGTGCTTTTTATCTAAATTCGAGTGGGCAAGATGGTTGTGAGCTTGATGGAGTCCGTGGTCACTTTTCATGTGATTTTGATGTAACTAATGCTGTAATGACATTGATTCTTCCAGATTCTATTAAGCTTGAGTATGATCTGAATTGTGCAATTTGCCTGGATTTTGTTTTCAATCCATATGCTTTGGGTTGTGGACACTTCTTCTGCAAGTCATGTGCTTGCTCTGCTGCATCTGTGATGACTTTCCAAGGCCTTAAAGCTGCAAGTCCAGAGTCAAAGTGTCCTATATGCAGAGAGGGTGGAGTTTATTCCAAGGCAGTCCGAATGTTAGAACTCGATCTGCTTATGAAAAGAAGGTGCAAAGACTATTGGAATTGA 888 0.4009 MKFGYTFKEYLQEEREWLVDENCAHIEYNRLKNVLKSCQNCKDTSSDKDQLCQCQSCPVCDQKFFSELMKEASDIAGYFSSRVQHLLHLHIAKGLQRYVLSLRQCFKNDRQALAQEGRILIEYITMNAIAMRKILKKYDKVHSSMNGENFKSKMHAEHIELLHSPWLIELGAFYLNSSGQDGCELDGVRGHFSCDFDVTNAVMTLILPDSIKLEYDLNCAICLDFVFNPYALGCGHFFCKSCACSAASVMTFQGLKAASPESKCPICREGGVYSKAVRMLELDLLMKRRCKDYWN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02702 295 ProSiteProfiles Zinc finger RING-type profile. 219 268 IPR001841 -
Car03g02702 295 CDD SPX_BAH1-like 2 147 - -
Car03g02702 295 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 295 IPR033326 -
Car03g02702 295 SMART ring_2 219 267 IPR001841 -
Car03g02702 295 ProSitePatterns Zinc finger RING-type signature. 234 243 IPR017907 -
Car03g02702 295 SUPERFAMILY RING/U-box 211 270 - -
Car03g02702 295 ProSiteProfiles SPX domain profile. 1 152 IPR004331 -
Car03g02702 295 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 205 293 IPR013083 -
Car03g02702 295 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1-LIKE-RELATED 1 295 - -
Car03g02702 295 Pfam RING-type zinc-finger 219 265 IPR027370 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02702 Car-Chr3 72716692 72721925 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02702 K16275 - gmx:100781704 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02702 03 72716692 72721925 Car03g02702 03 72716692 72721925 ECH