Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02693 ATGGATTCAGGATCGTGGAGTTCTTCTACAAAGACCAAATCCCGTTCCCCTTTCCAAGAACGCTTCCTCCACAGAAAGAATTCGTCTCAAGATAACTTGGATAGGTTCATCCCAAATAGATCAGCCATGGACTTCGGTTACGCTCACTACATGCTAACGGAGGGTAGAAAGGGAAAAGAGAATCCAACCGTGACGTCACCATCTCGGCAAGCCTATCAGAAACAACTCGCCGAAGCCGTAAACATCAACGATCGAACACGAATCTTGGCCTTCAAGAATAAGCCTCCAGCGAAAGTCGAACTCATCCCTAGGGATATTCTTTCCCCTCCTCCTCAATCCAGATCATCCAAACCGAAACGACACATTCCTCAGAGTTCTGAGAGGACATTGGATGCCCCTGATATCTTAGATGACTTCTACTTGAATTTATTAGATTGGGGTAGCGGTAATGTCCTTAGTATTGCCCTTGAAAGTACAGTTTATCTTTGGAATGCTTCTGATAGTTCCACTTCAGAACTTGTCACTGTGGACGAAGATCAAGGCCCTGTCACCAGTGTTAGCTGGGCCCCAGATGGTCGACATCTAGCAGTTGGTTTGAACAACTCTCATGTCCAGCTCTGGGATACCACTTCTAATAAACTGCTGAGGACATTGAAGGGTGGACATAGAGCAAGAGTGGGCACACTGGCTTGGAACAGTCATATTCTGACAACAGGGGCAATGGATAGTAAAATAGTAAACAATGACGTTAGAGTGAGATCTCACATTGTTGAAACTTACAGGGGACACAGCCAGGAAGTGTGTGGGCTCAAGTGGTCACCCTCAGGAACACAATTGGCAAGTGGAGGAAACGATAATGTTGTTCACATATGGGATAGGTCTGTGGTTTCTTCAAATTCACCTACCCGTTGGCTTCACAGGTTTGAGGAACACAATGCTGCAGTGAAGGCACTGGCTTGGTGTCCTTTTCAGGGAAATCTATTGGCTTCTGGTGGAGGTGGGGGTGATCATTGCATTAAGCTGTGGAACACACACACGGGTGCGCGCTTGAATTCTGTTGATACGGGATCACAGGTATGTTCTCTGCTGTGGAACAAGAACGAGCGTGAGCTTCTTAGTGCACATGGTTACACTCAGAACCAGCTTACCCTTTGGAAGTATCCTTCGATGGTGAAGATGGCAGAGCTCAACGGTCACACCTCGAGGGTGCTGTATATGGCGCAGAGTCCAGATGGATGCACGGTGGCATCTGCAGCCGCAGATGAGACACTGAGATTTTGGAATGTCTTTGGAACCCCAGCAGCAGCATGCAAAGCAACACCAAAGAGAAATAAAGAACCCTTTGCTAATTTCAACAGTATCCGTTGA 1368 0.4708 MDSGSWSSSTKTKSRSPFQERFLHRKNSSQDNLDRFIPNRSAMDFGYAHYMLTEGRKGKENPTVTSPSRQAYQKQLAEAVNINDRTRILAFKNKPPAKVELIPRDILSPPPQSRSSKPKRHIPQSSERTLDAPDILDDFYLNLLDWGSGNVLSIALESTVYLWNASDSSTSELVTVDEDQGPVTSVSWAPDGRHLAVGLNNSHVQLWDTTSNKLLRTLKGGHRARVGTLAWNSHILTTGAMDSKIVNNDVRVRSHIVETYRGHSQEVCGLKWSPSGTQLASGGNDNVVHIWDRSVVSSNSPTRWLHRFEEHNAAVKALAWCPFQGNLLASGGGGGDHCIKLWNTHTGARLNSVDTGSQVCSLLWNKNERELLSAHGYTQNQLTLWKYPSMVKMAELNGHTSRVLYMAQSPDGCTVASAAADETLRFWNVFGTPAAACKATPKRNKEPFANFNSIR 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02693 455 Pfam Anaphase-promoting complex subunit 4 WD40 domain 175 233 IPR024977 -
Car03g02693 455 MobiDBLite consensus disorder prediction 1 35 - -
Car03g02693 455 MobiDBLite consensus disorder prediction 100 128 - -
Car03g02693 455 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 176 213 - -
Car03g02693 455 MobiDBLite consensus disorder prediction 17 31 - -
Car03g02693 455 SUPERFAMILY WD40 repeat-like 136 429 IPR036322 GO:0005515
Car03g02693 455 MobiDBLite consensus disorder prediction 1 16 - -
Car03g02693 455 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 260 292 - -
Car03g02693 455 ProSiteProfiles Trp-Asp (WD) repeats profile. 176 217 IPR001680 GO:0005515
Car03g02693 455 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 1 453 IPR033010 GO:0010997|GO:0097027|GO:1904668
Car03g02693 455 ProSiteProfiles Trp-Asp (WD) repeats profile. 260 292 IPR001680 GO:0005515
Car03g02693 455 CDD WD40 159 428 - -
Car03g02693 455 Gene3D - 85 431 IPR015943 GO:0005515
Car03g02693 455 SMART WD40_4 169 208 IPR001680 GO:0005515
Car03g02693 455 SMART WD40_4 211 249 IPR001680 GO:0005515
Car03g02693 455 SMART WD40_4 301 343 IPR001680 GO:0005515
Car03g02693 455 SMART WD40_4 389 428 IPR001680 GO:0005515
Car03g02693 455 SMART WD40_4 253 292 IPR001680 GO:0005515
Car03g02693 455 Pfam WD domain, G-beta repeat 393 428 IPR001680 GO:0005515
Car03g02693 455 Pfam WD domain, G-beta repeat 305 343 IPR001680 GO:0005515
Car03g02693 455 Pfam WD domain, G-beta repeat 257 292 IPR001680 GO:0005515
Car03g02693 455 ProSitePatterns Trp-Asp (WD) repeats signature. 415 429 IPR019775 -
Car03g02693 455 ProSiteProfiles Trp-Asp (WD) repeats profile. 396 429 IPR001680 GO:0005515
Car03g02693 455 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 396 429 - -
Car03g02693 455 PANTHER CELL DIVISION CYCLE 20.2, COFACTOR OF APC COMPLEX-LIKE 1 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02693 Car-Chr3 72631851 72634244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02693 183 372 Miscellaneous Gene Families AT5G08390 28.497 3.44e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02693 K03363 - egr:104450300 729.939