Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02688 ATGGATTCCAAATCCATCTATGGTGTCTCCAATTTCATCCCTCTTTTCATTCTCTTTCTTCTCCCACTCCATTCCGCTTCTTccaccaccaccaccaccaccaataccactcaaatcaattccaattcaatccTCGTCGCACTTCTCGATTCCCACTACACCGAACTCTCAGAACTCGTTGAAAAAGCTCTTCTCCTTCAGAAACTCGAACAAACCCTAGGTAACCACAACATCACCATCTTCGCACCAAAAAACCAAGCTCTAGAACGCGACCTCGACCCTGAATTCAAACGATTCCTCTTAGAACCACGAAATCTCAAATCACTCCAAACGCTTTTAATGTCACACATTCTCCTCTCACGAATCGAATCTCATCACTGGCCTTCCGTTAACCGTCACCACCACACACTCTCCAACCACCGTCTCCATTTAACCACAAACCCTACCGGTAAAAAAACCGTCGACTCCGCCGAGATCCTCCGTCCAAACGACGTCATCCGTCCCGACGGCGTAATCCACGGAATCGAACGCCTCATTATCCCCCGCTCCGTACAAGAAGATTTCAACCGGAGAAGAAACCTCCGTGACATCTCCGCAATTCTCCCGGAAGGAGCACCGGAGGTAGATCCACGAACAAACCGTTTAAAAAAaccagcaccagtacccgccggagcaccaccagtacttccaatctacaacgcaatggcaccaggaccatcactagctccggcgcctgcaccaggaccgggaggagcacGTCATCACTTCAACGGAGAACGTCAAGTGAAAGATTTCATTCACACACTGTTGCATTACGGCGGTTACAACGAAATGGCGGATATTCTAGTGAACCTAACGTCGCTTGCAACGGAAATGGGACGTTTAGTTTCAGAAGGTTATGTTCTAACCGTTTTGGCACCAAACGACGAAGCAATGGCGAAATTAACGACTGATCAATTGAGTGAACCAGGTGCACCTGAACAGATCATATACTATCATATAATTCCCGAGTATCAAACGGAGGAAAGTATGTATAACGCCGTTAGGAGATTTGGTAAAGTTAGTTATGATACACTCCGTTTGCCTCATAAGGTTGTTGCTGAGGAATCTGACGGTTCCGTTAAATTTGGTCACGGTGATTCTTCTGCTTATTTGTTTGATCCTGATATTTATACCGATGGAAGGATTTCCGTTCAGGGTATTGACGGTGTTCTTTTACCTCCTGAGGAAGAGAGCGAAGATGATTCTTCTATTCGCCATACTAAAATTCCTCTTGTTAAAGTCGCTACTAAACCCAGAAGAGGGAAGTTGCTGGAACTCGCCTGTAGCATGGTTGGATCTTTTGGAAGTGTCTGCTCATGA 1362 0.4001 MDSKSIYGVSNFIPLFILFLLPLHSASSTTTTTTNTTQINSNSILVALLDSHYTELSELVEKALLLQKLEQTLGNHNITIFAPKNQALERDLDPEFKRFLLEPRNLKSLQTLLMSHILLSRIESHHWPSVNRHHHTLSNHRLHLTTNPTGKKTVDSAEILRPNDVIRPDGVIHGIERLIIPRSVQEDFNRRRNLRDISAILPEGAPEVDPRTNRLKKPAPVPAGAPPVLPIYNAMAPGPSLAPAPAPGPGGARHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNAVRRFGKVSYDTLRLPHKVVAEESDGSVKFGHGDSSAYLFDPDIYTDGRISVQGIDGVLLPPEEESEDDSSIRHTKIPLVKVATKPRRGKLLELACSMVGSFGSVCS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02688 453 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 1 450 - -
Car03g02688 453 ProSiteProfiles FAS1/BIgH3 domain profile. 262 390 IPR000782 -
Car03g02688 453 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 1 450 IPR044654 -
Car03g02688 453 Gene3D FAS1 domain 26 181 IPR036378 -
Car03g02688 453 SUPERFAMILY FAS1 domain 38 182 IPR036378 -
Car03g02688 453 SUPERFAMILY FAS1 domain 241 409 IPR036378 -
Car03g02688 453 ProSiteProfiles FAS1/BIgH3 domain profile. 40 179 IPR000782 -
Car03g02688 453 Pfam Fasciclin domain 52 181 IPR000782 -
Car03g02688 453 Pfam Fasciclin domain 297 407 IPR000782 -
Car03g02688 453 SMART fasc_3 303 408 IPR000782 -
Car03g02688 453 SMART fasc_3 79 182 IPR000782 -
Car03g02688 453 Gene3D FAS1 domain 281 408 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02688 Car-Chr3 72604244 72607244 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02688 - - gmx:100818575 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02688 03 72604244 72607244 Car03g02688 03 72604244 72607244 ECH