Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02673 ATGGATCCGGCGAGAACGCCACTAGGACAAATGCTATTGGAGGAAATCACTCCGGTTGTAATGGTCCTTTCTACTCCCTCCGTCGAAGAAGCTTGCTTAAAAAACGGTCTCTCATTCCTCCAGATGCTCACACCTTTCTGCTCATTCAACAACATCGACGTTCCAGTGAGAACCGCTAGTGATCAGCCTTATCGCATTCATAAATTCAAATTGCGTCTCTTCTATGGTTCCGGTGTTAGGAAGCCCGATTTGAAGGTTGCTGAAGAGCAATTGAAGCAAGTTATTACAGATTCAGGGGAGAAAGTGTTTTCTGAGCTGTGCACAGATGTGCCGGAAATCAATCATGAACTTGCTAGTTCTGAAGACAGAAATACACCATCCTGGTTTCAGTTTTTCAATAAAGAGCTTGTCCGCGTGGCTTCCTTTTCAGACCATGAAGCTTTTGATCATCCTGTGGCTTGTCTTTTAGCTGTTTCTTCAAAAGATGAACAGCCAATTAACAGATTTGTTGACCTTTTCAATACCAACAAGCTTCCTTCCCTTCTTAATGACGGTACAATGGATCCAAAGATTTCAAAGCATTACTTGTTAGTGCATGACAATCAAGATGGTCCCACAGAAAGCAGAGCAAGTAAAATATTGACAGAAATGAGGAGTACATTTGGAACTAGTGACTGTTTGATGCTTTGCATTAATTCTTCCCCAGATGCTCCAATCAAGCATCAAGTTAATCCTTGGGCTTCACAAATATCCGATACCTCACCTAATCAAGATCTTGACTGCTTTCTTAACATTGATGATATCAATGAGATCAAAGATTTAATGCAAGATTTAACATCTAAGCACATCATTCCTAACATGGAGCAAAAAATTCGTGTGCTTAATCAACAGGTTTCTGCAACACGAAAAGGTTTTAAAAACCAAATAAAGAATTTATGGTGGAGAAAAGGAAAAGAAGATGGTGCAGATTCTCTCAATGGTCCTACGTATAACTTTAACTCCATTGAATCCCAGATTCGAGTTTTGGGTGACTATGCTTTCATGTTACGAGATTATGAACTTGCCTTGTCAAATTATCGCCTAATTTCCACAGATTACAAGATTGATAAAGCCTGGAAGCGTTATGCTGGTGTGCAGGAAATGATGGGGCTTACGTACTTCATGTTGGATCAATCAAGAAAAGAAGCTGAATATTGCATGGAGAATGCTTTTAACACATATTTAAAACTAGGGTCATTGGGTCAGCAAAATGCTACACGATGTGGTCTGTGGTGGACAGAAATGTTGAAAGCACGAGACCTATATAAAGAGGCAGCTACAGTTTACTTTCGTATTTGTGGTGAGGATATCCTACATTCTGCTGTAATGCTTGAGCAAGCATCATACTGTTACTTGCTGTCTAAACCCTCCATGTCACGCAAATATGGATTTCATCTAGTGCTTTCTGGGGAGCAGTATAAAAAGTGTGATCAGATCAAGCATGCAATTCGAACATACAGATGTGCTCTTTCTGTTTTTAGAGGAACTACTTGGAGTTATATTAATGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTATGATGTGGCTGTCAAGCATATGACGGAAATCTTGGCTTGTAGTCACCAGTCCAAGACGACACAAGAATTATTCCTGGGTGACTTTCTTCAAATTGTGGAGAAAACCGGGCGGACATTCGAGGTAACAAAACTTCAATTGCCTGTGATCAACATCTCTTCACTCAAGATCATTTTTGAAGATCACCGAACTTTTGGATCACCTTCAGCTGTTAACACTAAAGAAGGCTTGTGGCATTCTTTGGAGGAAGAAATGATACCGTCATTTACTGCTGCCAAGGCTAATTGGTTGGAGTTGCAATCAAAGCTTATTCCAAAAAAGCTCAGTCAATCAAATGTTTGTGTTGCTGGAGAAGCTGTGAAGGTTAATATTGAGTTCAGAAACCCTCTGCAAATCACAGTTCCCGTATCTGGTGTTACACTTATATGCAAATATTCTACTAGTACGGAAGAACTTACATCAAATGAAAATGAATTAAGCTTGAAGACCGATAATGAAGTTGACCACTTCAGGGATATGAGCTCAGGCAATTCCTCGTTTTTGGTTTCTGAGGTTGATTTCTCACTAGGAGGTGGTGAAACTACCATGGTACAACTATCAGTTACTCCTAAGGCAGTTGGTACTCTTGAAATTCTTGGTGTTCGATGGAAACTATCAGGTGCAATAGTTGGATTTCACAACTTTGAGTTGAGCCACCCAAAGAAGAATATTGTAAAAGGAAGAAGGAAGCCAAAGCACCCACCTAATGAGAAGTTTAAATTTATGGTGATCAAGAGCATACCCAAGATTCAGGGTTCCATTCACTCTTTACCTCGAAAGGCATATGCTGGAGATTTACGGCAACTTATGCTGGAGTTGAGGAATCCTTCAGAGTTTCCTGTTAAGAATCTGAAGATGAAGATAAGTCACCCTAGATTCCTGATTATTGGGAGTCAAGAAAATGCAAAATTAGAGTTTCCTGGTTGCTTAACAAAGAATATAGATTCAGTGCAAAGTGTTACACATGCTAATCCTAATATTATGTCTGACACTGTATTTTCGTTTCCGGTGGACACGTCAGTTCAAGGTGAAACACCCTTATTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCTGGTGATATTTCTCTTTATATGAGCATTTATTATGAGGTTGCAGATATATCAAGTGTCATTAGATATCGCACTCTTCGCTTGCATTACAATGTGCAGGTATTACCATCATTAGATGTCTCATTTCAAATTAGTCCTTCCCGATTAAGAATACAAGATTTTCTTGTTCGATTGGATGTTGTTAACAAGACAAGCTCAGAAAGCTTCCAAGTTTATCAGTTGTCATCTATTGGGCATCACTGGGAAATATCATTACTTCAACCTCCTGATGCTATTTTTCCTTCGCAAACTTTGATGGCTGGTCAAGCAATATCCTGTTTCTTCACGTTGAAGAAATCGAGGAGATTACCGACATTGGAATACAACATATCTACCACCCATGACAGAAGTGATGATGTACTATTGGTTCCTCAATGCAGTCAGGATTTAGTTTACAATACTAATAATGTACCTTTGGTAAATTTCCACCATTATGAAAGATTGCAGCAGAAAGTGTCACTTGAGAATCTGGGTGACTTGAATACTGTTGATTTTGTGTTGATCTCTCGGCCTCTCAACAGTACCATCAATCATGGTTTATCTGATTCTCCTCATGTTATGTCTCACCATTCGTGTCACTTAAGTACCTCTAGCACGGGTCCCATTTCATGGCTAGTGGATGGACCTCAAACCTTGCATCATGACTTCTCTGCATCCTTCTGTGAAATAAATTTGAAGATGCATCTTTACAATTCATCTGGTGTCACTGTTTTTGTGCGCATCGACACATCAGATTTTGATGGTAGTGGTGGACATCTGAACAGTGTAAACGCAGTTCAATCAGCAACTCCTGATAATCCAGCAGGTTGGCATGATGTTACACCAGTGAATGAACTCAAAGTAACATCAAATGCTCTCGAAACCCAACCAGGAAAAGCACTATCATTGGAAAGTGTTTCCCCATACATTTGGTCTGGGTCAAGCTCAACCAATCTCCACCTTGAGCCCATGTCCTCAGCAGAAGTTCCTCTTCAGATCTGTGTATTCTCTCCAGGGACATATGACCTGTCAAATTATGTTTTGAATTGGAATCTTCTGGGAGACAGCGACGAAATGAGTAAGCCTTCGGGCAAGTGCCAGGGCTATAAATACTATTTGACAGTGCTCCAATCCACTTGA 3861 0.4015 MDPARTPLGQMLLEEITPVVMVLSTPSVEEACLKNGLSFLQMLTPFCSFNNIDVPVRTASDQPYRIHKFKLRLFYGSGVRKPDLKVAEEQLKQVITDSGEKVFSELCTDVPEINHELASSEDRNTPSWFQFFNKELVRVASFSDHEAFDHPVACLLAVSSKDEQPINRFVDLFNTNKLPSLLNDGTMDPKISKHYLLVHDNQDGPTESRASKILTEMRSTFGTSDCLMLCINSSPDAPIKHQVNPWASQISDTSPNQDLDCFLNIDDINEIKDLMQDLTSKHIIPNMEQKIRVLNQQVSATRKGFKNQIKNLWWRKGKEDGADSLNGPTYNFNSIESQIRVLGDYAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFMLDQSRKEAEYCMENAFNTYLKLGSLGQQNATRCGLWWTEMLKARDLYKEAATVYFRICGEDILHSAVMLEQASYCYLLSKPSMSRKYGFHLVLSGEQYKKCDQIKHAIRTYRCALSVFRGTTWSYINDHVHFHIGQWYASLGMYDVAVKHMTEILACSHQSKTTQELFLGDFLQIVEKTGRTFEVTKLQLPVINISSLKIIFEDHRTFGSPSAVNTKEGLWHSLEEEMIPSFTAAKANWLELQSKLIPKKLSQSNVCVAGEAVKVNIEFRNPLQITVPVSGVTLICKYSTSTEELTSNENELSLKTDNEVDHFRDMSSGNSSFLVSEVDFSLGGGETTMVQLSVTPKAVGTLEILGVRWKLSGAIVGFHNFELSHPKKNIVKGRRKPKHPPNEKFKFMVIKSIPKIQGSIHSLPRKAYAGDLRQLMLELRNPSEFPVKNLKMKISHPRFLIIGSQENAKLEFPGCLTKNIDSVQSVTHANPNIMSDTVFSFPVDTSVQGETPLLWPLWFRAAVPGDISLYMSIYYEVADISSVIRYRTLRLHYNVQVLPSLDVSFQISPSRLRIQDFLVRLDVVNKTSSESFQVYQLSSIGHHWEISLLQPPDAIFPSQTLMAGQAISCFFTLKKSRRLPTLEYNISTTHDRSDDVLLVPQCSQDLVYNTNNVPLVNFHHYERLQQKVSLENLGDLNTVDFVLISRPLNSTINHGLSDSPHVMSHHSCHLSTSSTGPISWLVDGPQTLHHDFSASFCEINLKMHLYNSSGVTVFVRIDTSDFDGSGGHLNSVNAVQSATPDNPAGWHDVTPVNELKVTSNALETQPGKALSLESVSPYIWSGSSSTNLHLEPMSSAEVPLQICVFSPGTYDLSNYVLNWNLLGDSDEMSKPSGKCQGYKYYLTVLQST 1286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02673 1286 SUPERFAMILY TPR-like 429 551 IPR011990 GO:0005515
Car03g02673 1286 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 638 830 IPR013935 -
Car03g02673 1286 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 168 519 IPR024420 -
Car03g02673 1286 Gene3D Tetratricopeptide repeat domain 328 555 IPR011990 GO:0005515
Car03g02673 1286 PANTHER TRANSPORT PROTEIN TRAPP 8 1285 IPR024420 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02673 K20305 - gmx:100809666 2182.53