Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02654 ATGGCTTATCTTCACATTCTCTTAACCCTCTCTCTTCTCTCTCTCATCACATTATCTTCTTCCAATCCAAACACAAACACTATCACACTTTCTCTCTCCCCTATATTCACCAAATCCCCATCTTCAGATCTATTCCACTCTCTCAAAAAAGCAACTTCATCTTCTCTAAAAAGAGCTCACCACCTCAAAACCCGCAAATTAAGTAAAAAAAACTCTCCTTCTTCTTCTTCCACCATAAACACACAAGTATTTGCAAAAAGCTACGGTGGTTACTCAATAAACCTCAATTTTGGAACACCACCACAAACCTTATCTTTCGTTTTAGACACAGGTAGCAGTCTCGTATGGTTCCCTTGTACCTCTCACTACCTCTGTTCCAATTGCAACTTCGCAAACATTAACCCAACAAATATCCCAACCTTCATTCCCAGTAAATCATCTTCCACAAGAATCATCGGTTGCACAAACAAAAAATGCGGTTACGTTTTCGGCTCCAACATTGAATCTCGTTGCCAAGGTTGCAATCCCCAATTTCAAAACTGTAACAACATTACTTGTCCTACTTATATACTTGAATACGGTTTAGGTTCAACCGCCGGTTTATTACTCTCTGAAAATCTCGATTTTCCGGGATATATCGTACCGGATTTTCTCGTCGGTTGTTCGATTTTCTCGACCGAACAACCCTCCGGTATCGCCGGATTCGGTCGCGGCGCAGAATCTCTTCCGGCGCAAATGGGTCTAACAAAATTCTCTTATTGTTTACTTTCTCACAATTTCGACGACACGCCGGTAAACAGTAACCTCGTTCTGCAAACCACTTCAACCGGCGATGGTAAAACAAGTGGCTTAAACTACACAACGTTTGTACAAAACCCATCCATGAGCAACCCTGCATTTCTCGAATACTATTATGTTAATCTTCGAAGTTTTCTTATAGGAGGTACACGTGTTAAGATTCCGTTTTATCTTTCTTCACCGGGAATGGACGGTAACGGTGGAACAATCGTTGATTCTGGAACAACGTTCACTTTTATGGAAAGACCAATCTTCGATTTGGTGGCACGACAATTTGAATTGCAACTTGCTAATTTTCCGAGAGCGACAGATATTGAAGCTGCATCGGGGTTTAATCTCTGTTTTGATTTCACCGGCAATAATTCGATACCGTTTCCGGAGTTAGTATTTCAATTTAAAGGTGGTGCTGAAATGGTGTTGCCTGTAGATGATTATTTCTCGTTGGTCGGTGATGGAGGGAATGTTGCGTGTTTGACTATTATGACCGATGGGAATTCTGTTCCGGCAACGAATACTGGTCCGGCGATGATTTTGGGGAATTATCAACAGCAGAATTTTATTATTGAGTTTGATTTGGAAAATGAAAGGTTTGGATTTGGGGCACATATTTGTCAAAGTAATGCTTAA 1425 0.4091 MAYLHILLTLSLLSLITLSSSNPNTNTITLSLSPIFTKSPSSDLFHSLKKATSSSLKRAHHLKTRKLSKKNSPSSSSTINTQVFAKSYGGYSINLNFGTPPQTLSFVLDTGSSLVWFPCTSHYLCSNCNFANINPTNIPTFIPSKSSSTRIIGCTNKKCGYVFGSNIESRCQGCNPQFQNCNNITCPTYILEYGLGSTAGLLLSENLDFPGYIVPDFLVGCSIFSTEQPSGIAGFGRGAESLPAQMGLTKFSYCLLSHNFDDTPVNSNLVLQTTSTGDGKTSGLNYTTFVQNPSMSNPAFLEYYYVNLRSFLIGGTRVKIPFYLSSPGMDGNGGTIVDSGTTFTFMERPIFDLVARQFELQLANFPRATDIEAASGFNLCFDFTGNNSIPFPELVFQFKGGAEMVLPVDDYFSLVGDGGNVACLTIMTDGNSVPATNTGPAMILGNYQQQNFIIEFDLENERFGFGAHICQSNA 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02654 474 Pfam Xylanase inhibitor C-terminal 304 466 IPR032799 -
Car03g02654 474 PANTHER OS07G0603500 PROTEIN-RELATED 7 470 - -
Car03g02654 474 Pfam Xylanase inhibitor N-terminal 91 259 IPR032861 -
Car03g02654 474 SUPERFAMILY Acid proteases 87 470 IPR021109 -
Car03g02654 474 Gene3D Acid Proteases 278 472 IPR021109 -
Car03g02654 474 PRINTS Pepsin (A1) aspartic protease family signature 97 117 IPR001461 GO:0004190|GO:0006508
Car03g02654 474 PRINTS Pepsin (A1) aspartic protease family signature 335 346 IPR001461 GO:0004190|GO:0006508
Car03g02654 474 PRINTS Pepsin (A1) aspartic protease family signature 442 457 IPR001461 GO:0004190|GO:0006508
Car03g02654 474 PANTHER BNACNNG47670D PROTEIN 7 470 - -
Car03g02654 474 ProSiteProfiles Peptidase family A1 domain profile. 91 466 IPR033121 -
Car03g02654 474 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 106 117 IPR001969 GO:0004190|GO:0006508
Car03g02654 474 CDD pepsin_A_like_plant 90 465 IPR034161 -
Car03g02654 474 Gene3D Acid Proteases 73 263 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02654 Car-Chr3 72310112 72311985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02654 70 470 Miscellaneous Gene Families AT1G44130 23.788 3.86e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02654 - - gmx:100805927 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02654 03 72310112 72311985 Car03g02654 03 72310112 72311985 ECH