Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02644 ATGGGTAACGCTCAGTCCCCTCCTACTGATCCTCGATTTCTTTCATCATCCAGAGCTTTTACTCAAAAGGAACTTCAACACTTAAGCTCTCTCTTCGATTCTCTCGCAACTCAATCACAGACCAATGCCAAATACATCTCTCCTTCAGTTTTTCAGACATATTTCAAACTCCATGGCCCTGTTGGAGAGAGGTTGTTTGATTTGGTTACTCAAGAGCGCAAGGATCAAAGGTTAACCTTTGAAGACCTCGTTGTTGCTAAAGCTACTTATGAGAAAGGGACAAAAGATGAAATTGAAGAATTCATGTTTCGCTTAGTAGATGTATCAGGAGATAATTTTGTAGGAAGGTCTGATTTGGAATCGGTTATGATTGCCATTTTTAACGATATATTGTGCATAAACGATTCTGAAGTTGGATCAAGTTCACATAAAGATATTGTCAACATATTTCTGAATGCTGCAAATTTCTCCGTACACGATGAAAAGTGCACTGAGGAGGCTATGTCTTTTGACGATTTCAGAAGTTGGTGCGCTCATCTCCCAACTGTGAGGAAGCTTCTTGGAGGCTTGCTTTTGCCACCTGATTCAGGAAGACCAGGTACTCAAATTCCTAATCTACTGATCCCGAAGGATATTGATACTAACATTGTACTTTTAAAAAAGGAGTATGCTTGGCATATAGGAGGAGCACTTTCTCAGCATGAGCTGGAAGATTGGAAGCTTTTGTATCATAGTTTTGTTAATGGTCTTAGTTTCAATACATTCTTGGGCAACATTTCAAATCATGAAGGCCCAACTGTGCTAATCATTAAGGATAAAGATGGTTATATATATGGAGGATATGGTTCTCAAAAATGGGAGCGGCATGCTGAGTTTTATGGAGACATGAAATGTTACCTTTTTCAACTAAATCCAAAGGCATCTATATTCCGGCCGACTGGAGCAAACAATAATCTGCAATGGTGTGCTGTCAACTTCAGTTCAGAGGAAATTCCAAATGGCATTGGTTTTGGGGGACGAGTGAATCACTTAGGGTTATTTATCTCAGCAAACTTTGATCAAGGGCATACATTTTCATGTTCTACATTTGGTAGTCCTTGCCTCTCAAAAACAAGCCGTATAATACCAGAAGTAATAGAATGTTGGGGAGTGACTCAAGGTGCTCCTGTACAAGGCAAGAACGATGGTGTTAAGGGAACTGTACTTGAGAGGTTTAAGGAAGATCGTCATATGCTCAATATGGTAGGCTTTTATTGGTATATTGTATCAACTATCTTGTGGAGTTTACTAGAAGGAAGGAATGCTGATATGGCTGCGCATCGGTTAGCCAAGATCACTAGCAGCACTACAGTGGAAAACGAAGTGGTTGATGAGTCCACCGCTAACTCCGGCCGTAGAACAGAAGTTTCGAACCATCAACACCTAGAGACCCACCCTTCTAATTTGAAACTGCATCTTCACTTCTACTCTCTAGACATGGACACTGATGCCATCAAAGATTCTCTGAACAAGCTGAAAGCTATTCGAATGGAgaatgatgaatatgaagatgaagttgatgattctgatgatgaagaGCTTGAACCGATCACTCTAGGTTTTCTTGAAAAGCCCAAGAATCGTCTCTATCTTTCCCGTCAATTTTTCCCAAGCAAAGCCGGAGGACTCCCGGCTTGGCTTGACCCACTGAATATTCCATCAGGGAGCTCTTGTGCGTGTGACATTTGTGGAGACCCTTTACAATTTGTGCTTCAGGTTTATGCACCAATGGTTGAGAAGGAAAGTACATTTCATCGGATGCTATTTGTTTTCATGTGTCCTTCCATGACATGTCTTCTCAGAGATCAGCATGAGCAATGGAAACGCCATCCAACAAAACAATGCAGAAGTGTGAAGATTTTTCGTTGCCAGTTACCTCGCACTAATCCTTTTTACTCGAGTGAATGCCCCAAATATGATGGAAGTGACAAACCTTCTAGCAGTGGAGCTGCTCTATGTGATTGGTGTGGTACCTGGAGAGGAAACAAGCTCTGCAGTAGTTGCAAACAAGTGCGGTATTGCTCTGAGAAACACCAGGCCATGAGTTGGCGTGCGGGGCATAAAATTGCTTGCCAGCAAATACAAGTTTCTGTACCTGTTTGTGGCCCTAACAAAAATGGAACTACCTCATTGGATTGTAAAGTTGGAAACAAAAACATATGGCCTGAATTTGAGATCATTGAAGATCAAAGTGAATATAAGGAAGACACACCTGAGGATGATAACTTAGCTAATTCCTTGATCTTGAGGAACAAGAGTGATGATACTATGAATTCACTCATGGATAGTTTTCAGGGTGATGGTGACAAAAAGAGTTGGGCCCACTTCCAGGAACGCATTGCCAATGCCCCTGAACAAGTGTTGAGGTATTATAGGAACTCTAGTGCTAAGCCAATATGGCCCATTTTAAGTGGTCGGCCATCCAAAGATGATATCCCTAAATGCATTTATTGTGGTGGACTCATGTGTTGTGAATTTCAGATTTTGCCACAGCTGTTGTATTATTTTGGGGTGGACAATGAAGAGAACTCTTTGGATTGGGCTTCGATCGTTGTGTATGCATGTGAAGCATCTTGTGAAGCAAGTTTGGCTTACAAGAATGAATTTGCTTGGGTTCAACTTTATTCACCTTCTGCTGCCAAATCGTGA 2688 0.4085 MGNAQSPPTDPRFLSSSRAFTQKELQHLSSLFDSLATQSQTNAKYISPSVFQTYFKLHGPVGERLFDLVTQERKDQRLTFEDLVVAKATYEKGTKDEIEEFMFRLVDVSGDNFVGRSDLESVMIAIFNDILCINDSEVGSSSHKDIVNIFLNAANFSVHDEKCTEEAMSFDDFRSWCAHLPTVRKLLGGLLLPPDSGRPGTQIPNLLIPKDIDTNIVLLKKEYAWHIGGALSQHELEDWKLLYHSFVNGLSFNTFLGNISNHEGPTVLIIKDKDGYIYGGYGSQKWERHAEFYGDMKCYLFQLNPKASIFRPTGANNNLQWCAVNFSSEEIPNGIGFGGRVNHLGLFISANFDQGHTFSCSTFGSPCLSKTSRIIPEVIECWGVTQGAPVQGKNDGVKGTVLERFKEDRHMLNMVGFYWYIVSTILWSLLEGRNADMAAHRLAKITSSTTVENEVVDESTANSGRRTEVSNHQHLETHPSNLKLHLHFYSLDMDTDAIKDSLNKLKAIRMENDEYEDEVDDSDDEELEPITLGFLEKPKNRLYLSRQFFPSKAGGLPAWLDPLNIPSGSSCACDICGDPLQFVLQVYAPMVEKESTFHRMLFVFMCPSMTCLLRDQHEQWKRHPTKQCRSVKIFRCQLPRTNPFYSSECPKYDGSDKPSSSGAALCDWCGTWRGNKLCSSCKQVRYCSEKHQAMSWRAGHKIACQQIQVSVPVCGPNKNGTTSLDCKVGNKNIWPEFEIIEDQSEYKEDTPEDDNLANSLILRNKSDDTMNSLMDSFQGDGDKKSWAHFQERIANAPEQVLRYYRNSSAKPIWPILSGRPSKDDIPKCIYCGGLMCCEFQILPQLLYYFGVDNEENSLDWASIVVYACEASCEASLAYKNEFAWVQLYSPSAAKS 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02644 895 SUPERFAMILY EF-hand 3 189 IPR011992 -
Car03g02644 895 MobiDBLite consensus disorder prediction 453 476 - -
Car03g02644 895 SUPERFAMILY HIT/MYND zinc finger-like 664 707 - -
Car03g02644 895 ProSitePatterns Zinc finger MYND-type signature. 666 704 IPR002893 -
Car03g02644 895 ProSiteProfiles TLDc domain profile. 217 385 IPR006571 -
Car03g02644 895 Gene3D - 1 188 - -
Car03g02644 895 SMART 109ultra 216 385 IPR006571 -
Car03g02644 895 Pfam Programmed cell death protein 2, C-terminal putative domain 784 886 IPR007320 GO:0005737
Car03g02644 895 ProSiteProfiles Zinc finger MYND-type profile. 666 704 IPR002893 -
Car03g02644 895 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 414 - -
Car03g02644 895 ProSitePatterns EF-hand calcium-binding domain. 107 119 IPR018247 -
Car03g02644 895 Pfam MYND finger 666 704 IPR002893 -
Car03g02644 895 Gene3D - 652 709 - -
Car03g02644 895 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 414 - -
Car03g02644 895 Coils Coil 498 525 - -
Car03g02644 895 MobiDBLite consensus disorder prediction 453 468 - -
Car03g02644 895 Pfam TLD 241 384 IPR006571 -
Car03g02644 895 ProSiteProfiles EF-hand calcium-binding domain profile. 94 129 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02644 102 416 EF-hand Containing Proteins AT5G06260 60.568 2.43e-138 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02644 - - adu:107494057 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02644 03 72216222 72226914 Car03g02644 03 72216222 72226914 ECH