Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02643 ATGGCAAGTTCAAGTCCTGCAGTCAACAGAAGATTGGAAGGAAAAGTGGCTTTGATAACCGGAGGAGCTAGTGGAATTGGAAAACGCACCGCTGAAATATTCGCCGAACAAGGAGCGAAAGTAGTGATTGCAGACATCCAAGATGAAGTTGGACATTCGGTTGTTGAATCCATAGGAGCATCAACATGTTTCTATGTACACTGCGATGTTACCGACGAGAACCAAGTAAAAAACGCCGTGGATAAAACCGTAGAAACATACGGAAAACTCGACATCATGTTCAACAATGCTGGCATAGGTGGCCCCAACAACGCTAGAATAATCGACAATGATAAAGCAGATTTCGAACGTGTTTTAAGTGTGAATGTTACAGGTGTTTTTGTGGGGATCAAGCACGCAGCACAAGCCATGATTCCAGCTCGCACAGGTAGCATCATAAGTACTTCTAGTGTAAGCTCTTATGTTGGTGGTGCCGCCTCACATGCTTATACTTGCGCTAAGCATGCTGTTGTTGGTTTAACAAAAAATGCGGCAGTTGAACTTGGACAATTTGGGATTAGGGTTAATTGTTTGTCTCCTTACGGTTGTGCAACTCCTTTGGCTACACAATTTATTGGATGTGATGATCATGTCTTTGAAAATGTCATGAGCGGCTTTGCTAATCTTAAGGGTGTCACATTTAAAACTGATGATGTGGCAAATGCAGCACTTTTTTTTGCTAGTGATGATTCAAAGTATATCAGTGGCCATAATTTGCTCATTGATGGAGGCTTTAGCATTGTTAATCCATCCTTTAACATGTTTCAGTATTCAGAGTCTTGA 822 0.4173 MASSSPAVNRRLEGKVALITGGASGIGKRTAEIFAEQGAKVVIADIQDEVGHSVVESIGASTCFYVHCDVTDENQVKNAVDKTVETYGKLDIMFNNAGIGGPNNARIIDNDKADFERVLSVNVTGVFVGIKHAAQAMIPARTGSIISTSSVSSYVGGAASHAYTCAKHAVVGLTKNAAVELGQFGIRVNCLSPYGCATPLATQFIGCDDHVFENVMSGFANLKGVTFKTDDVANAALFFASDDSKYISGHNLLIDGGFSIVNPSFNMFQYSES 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02643 273 Gene3D - 3 270 - -
Car03g02643 273 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 7 270 - -
Car03g02643 273 PANTHER SECOISOLARICIRESINOL DEHYDROGENASE-LIKE 7 270 - -
Car03g02643 273 Pfam Enoyl-(Acyl carrier protein) reductase 21 259 - -
Car03g02643 273 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 IPR002347 -
Car03g02643 273 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 IPR002347 -
Car03g02643 273 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 IPR002347 -
Car03g02643 273 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 150 178 IPR020904 GO:0016491
Car03g02643 273 PRINTS Glucose/ribitol dehydrogenase family signature 16 33 IPR002347 -
Car03g02643 273 PRINTS Glucose/ribitol dehydrogenase family signature 88 99 IPR002347 -
Car03g02643 273 PRINTS Glucose/ribitol dehydrogenase family signature 137 153 IPR002347 -
Car03g02643 273 PRINTS Glucose/ribitol dehydrogenase family signature 163 182 IPR002347 -
Car03g02643 273 PRINTS Glucose/ribitol dehydrogenase family signature 184 201 IPR002347 -
Car03g02643 273 PRINTS Glucose/ribitol dehydrogenase family signature 222 242 IPR002347 -
Car03g02643 273 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 261 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02643 Car-Chr3 72212238 72213479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02643 8 258 Miscellaneous Gene Families AT4G05530 32.685 9.96e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02643 - - gmx:100802915 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02643 03 72212238 72213479 Car03g02643 03 72212238 72213479 ECH