Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02624 ATGGTTCTCTCAAAGTCTCTAACCATCTTTGGAGCGGTTGTCTCCATTTTTTTGTTGGTATTAAACAATGGTGTTGAAGCATTTCATAAAATATACCCTCATCTTCAATCCGTTTCAACAATATCTGTGAGCGAAGTGCATAGAACTGGATACCATTTCCAACCTCCTAGGAATTGGATCAACGATCCAAATGGACCAATGTACTACAATGGATACTATCACTTGTTCTACCAATACAACCCAAAAGGTTCGGTGTGGGGGAACATTGTGTGGGCCCACTCAGTATCAAAGGATCTTATAAATTGGAAATCAGTTGAACATGCTCTTTATCCATCTAAATCCTTTGACAAATATGGATGTTGGTCCGGATCAGCCACAATAGTTCCGGGTAAAGGACCTGTCATACTTTACACAGGAATTATTGACGAAAACAGCACTCAAGTCCAATGTTATGCTGTACCCGAAGATTTATCTGACCCGCTTCTTAAAAAATGGATCAAACCTGATAAATACAACCCGTTTTTGGTAGCTGATGAAGGAGTAAACGGTAGTGCATTTCGTGATCCAACAACTGCATGGAAGGGTAAAGATGGAATTTGGAAAATATTGGTTGGTAGTAGAAGGAAACATAGAGGAATGGCTTATTTGTATAAAAGTAAAGATTTTGTGAAATGGGTTCGAGTCAAACACCCGATCCATTCAGCAACAACGGGTATGTGGGAGTGTCCAGATTTTTATCCGGTTTTATTGAAAGGGAAAGATGGGTTGGATGCATCAGTGGAAGGTAGTCATGTAAAACATGTGTTAAAGAATAGTCTTGACTTGACTAGATTTGAGTATTATACATTAGGTACATATTTTAGTGATAAGGATAAGTTTATTCCTCATAATACTTCAGAGGATGGTTGGGGTGGCCTAAGATATGATTATGGTAATTTCTATGCTTCCAAGTCATTTTTTGATCCAAGCAGAAATCGAAGAGTCATTTGGGGTTGGGCTAATGAGTCTGATTCCAAGGAAGATGATGTTAAAAAAGGATGGGCTGGAATTCAGGCAATTCCAAGAGTTGTGTGGCTTGATTCTACCGAaagacagttagtacaatggcccgttgaagaattgaatggactaagagggaaagaagttagtatgaacaatcaaaagcttcaaaagggtgattatgttgaagtaggtggaataactgcagcacagGCAGATGTGGAAGTTACTTTCTCATTTTCAAGTTTGGAGAAGGCAGAGCCGTACGATCCTAGTTGGGTAAACGCACAAGATCTTTGTTTTCATAAAGGTTCAAAAGTTGAAGGTGGAGTTGGGCCTTTTGGGCTTTTGACTTTGGCTTCAGAAAATTTGGCTGAGTTCACTCCCGTGTTCTTCAGAATTTTCAAAGCTCCAAACAAACATGTCGTTCTTTTATGCTCTGATGCCTCCAGTTCTTCTTTGAAGAGTGAATTGTACAAGCCATCATTTGCTGGATTTGTAGATGTGGATTTAGCCTCAAACAAACTTTCTCTTAGGAGTTTGATTGATCACTCAGTAGTGGAAAGTTTTGGAGAAGGAGGGAAAACAAACATTTTGTCTAGGGTTTATCCGGTGCTAGCCGTTACAAACCAAGCTCATTTATTTGTGTTTAATAACGGTACCGAACTAATCACTGTGGAGAACCTCAAAGCATGGAGTATGAAGTCGGTTGAAATAAATTGA 1722 0.3641 MVLSKSLTIFGAVVSIFLLVLNNGVEAFHKIYPHLQSVSTISVSEVHRTGYHFQPPRNWINDPNGPMYYNGYYHLFYQYNPKGSVWGNIVWAHSVSKDLINWKSVEHALYPSKSFDKYGCWSGSATIVPGKGPVILYTGIIDENSTQVQCYAVPEDLSDPLLKKWIKPDKYNPFLVADEGVNGSAFRDPTTAWKGKDGIWKILVGSRRKHRGMAYLYKSKDFVKWVRVKHPIHSATTGMWECPDFYPVLLKGKDGLDASVEGSHVKHVLKNSLDLTRFEYYTLGTYFSDKDKFIPHNTSEDGWGGLRYDYGNFYASKSFFDPSRNRRVIWGWANESDSKEDDVKKGWAGIQAIPRVVWLDSTERQLVQWPVEELNGLRGKEVSMNNQKLQKGDYVEVGGITAAQADVEVTFSFSSLEKAEPYDPSWVNAQDLCFHKGSKVEGGVGPFGLLTLASENLAEFTPVFFRIFKAPNKHVVLLCSDASSSSLKSELYKPSFAGFVDVDLASNKLSLRSLIDHSVVESFGEGGKTNILSRVYPVLAVTNQAHLFVFNNGTELITVENLKAWSMKSVEIN 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02624 573 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 5 572 - -
Car03g02624 573 SUPERFAMILY Concanavalin A-like lectins/glucanases 370 570 IPR013320 -
Car03g02624 573 SMART glyco_32 52 527 IPR001362 GO:0004553|GO:0005975
Car03g02624 573 CDD GH32_Fruct1-like 58 359 - -
Car03g02624 573 Pfam Glycosyl hydrolases family 32 N-terminal domain 52 370 IPR013148 -
Car03g02624 573 Gene3D Glycosyl hydrolase domain; family 43 56 383 IPR023296 -
Car03g02624 573 Pfam Glycosyl hydrolases family 32 C terminal 373 566 IPR013189 -
Car03g02624 573 Gene3D - 384 567 - -
Car03g02624 573 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE PROTEIN 5 572 - -
Car03g02624 573 SUPERFAMILY Arabinanase/levansucrase/invertase 42 371 IPR023296 -
Car03g02624 573 ProSitePatterns Glycosyl hydrolases family 32 active site. 52 65 IPR018053 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02624 Car-Chr3 72068497 72074434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02624 24 573 Glycoside Hydrolase AT2G36190 62.766 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02624 K01193 - gmx:100799008 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02624 03 72068497 72074434 Car03g02624 03 72068497 72074434 ECH