Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02623 ATGTCTGGTAAAGAGAAAGGTGTTAATGTTCAAGTTCTTCTCCGATGCAGGCCGTTTAGCGAAGATGAATTACGAAGCAATGCACCTCAAGTAGTTACTTGTAATGATTACAATAGAGAAGTTGCGGTGTCTCAGAATATTGCCGGTAAACACATCGACAGGGTTTTCACCTTTGATAAGGTTTTTGGTCCTTCTGCACAACAAAGAGATCTTTATGATCAAGCTGTTATTCCGATAGTAAATGAAgttctagagggatttaattgtactatatttgcttatggtcaaactggtactggaaaaacgtatacaatggaaggTGAATGCAAAAGATCTAAGAGTGGACCGAATGGAGAGTTGCCTTCAGGAGCAGGAGTGATTCCCAGGGCTGTTAAGCAGATTTTTGACACACTCGAGGGCCAGAATGCGGAGTATAGTGTGAAAGTTACATTTTTAGAATTGTATAATGAGGAGATAACTGATTTGCTTGCACCGGAGGAGCTTTCAAAGGTTTCTTTGGAGGAGAAGCAAAAGAAGCAGCTGCCTCTCATGGAGGATGGCAAAGGTGGAGTTCTTGTTAGAGGGTTGGAGGAAGAAATTGTGACGAGTGCTAATGAGATTTTTACTCTACTCGAGAGAGGGTCTTCCAAACGGCGAACTGCAGAAACTTTACTAAACAAGCAGTCTAGTCGTTCACATTCATTGTTTTCAATTACTATCCACATAAAGGAAGCAACTCCTGAAGGCGAAGAACTGATTAAATGTGGTAAACTGAATTTGGTAGATCTTGCTGGCTCAGAAAATATATCTCGTTCCGGTGCTAGGGAGGGTCGTGCCAGAGAAGCTGGAGAAATTAATAAAAGTTTGCTTACTTTAGGAAGGGTGATTAATGCACTTGTGGAACACCTTGGTCATATCCCTTACAGGGATAGCAAGTTGACACGTTTACTTCGCGATTCACTTGGAGGAAGAACCAAGACATGCATTATAGCGACAGTATCTCCCGCTGTTCATTGCTTAGAGGAAACTTTGAGCACATTGGATTATGCACACAGGGCAAAGAACATTAAAAATAAGCCAGAGATCAATCAAAAAATGATGAAATCAACACTTATCAAGGATCTTTATGGTGAAATTGAACGCCTTAAAGCAGAGGTTTATGCTACCCGTGAGAAAAATGGGGTCTATATTCCAAAGGAAAGATACCATCAGGAAGAGATTGAAAAGAAGGCTATGGCAGATCAGATTGAGCAGATGGGCATCACAATAGAATCTTATCAGAAGCAACTAGAGGATGTGAAAAACAATTATGTTGCCCAAGTTCGTCAATGCTCTGATTTGAGCAACAAACTTGATATCACTGAGACAAACTTGAACAAGACTGGCAAGTTGCTTGCCAATAGAGAGGAAGATTTAAAGAAGTGTCGGTATACCTTGAATGAAAAGGAATTCATAATATCTGAACAGAGAAAAGCAGAAAATGCTTTAGCTCATCAAGCATGTGTTTTACGAGCCGATTTGGAGAAAGCTCTTCAGGATAATGCTTCATTGTTTGTGAAAATTGGTAGGAGAGAAGATAAACTGAGCTCAGATAACAGGGCTGTTGTGAACAATTTTCAAGCAGAACTTGCCCAACAGGTTGGTTCTCTTTGCAACACTGTTGCAACATCGTTATCTGAACAGAATGGACATCTACAAGGTGTGGAGAAGCTTTGTAACTCCTTTTTAGGGATTCACGATAAGGCGGTCATCGATTTGAAAGACAAAGTGAAAGACTTGAGGGCCGTGTATGTGTCTCATATTGAGGCAGTGCAAAATGTTGTGCGTTTGCATACGGCAAGCTCTGATGCAACCATGGAGGAGTTATCGTCTGCCATATCTTCCCACGGTCATTCTATTGAAGAATTTCTTGCAACTGCGGCCACTGAAGTTGGCTCCATATTTGACGAACTTCAGAGCTGTCTTTCAACACAACAGGGTGAATTGTCACTTTTTGCGAGGGAAGTACGCAATAGATTCAATCTAAGTGTGGAACAAATAAAGGAGATATCTGAGCGATCTGAAGAATTAGTGGAAAAGCTTTTCGTGGAATCCAAAAAGCTTGAAGATTTTGTATCACAGGCTGACCAAATGCAACAGGAGAGCATTGATGAGTTTAAGAAAGCTTATGAGGAGCAGTCAAAATCTGAGTCTGAGAAACTCATTTCTGATATGACTAGTTTGGTTTCTGAACACATTCGTCGTCAAATCAATCTTGTAGACTCAAAGCTTGTTGATCTTAGAGATAGTGGTATCAAGAACAAGTTATTCTTGGATGGACATGTGTCATCAGTTGGAGATATTGTGACCAATGCAAAAAGGAAATGGCAGACCTTTTGCATACAAGCGGAAAAAGAAGCAAAAGATACGGCTGATTATTCTGCAGCAAAGCATTGTCGTATGGAAGTACTCCTGCAGCAGAGTGTTAATACTGCTCATTTGGCTTTCGAACATGTAAAGAGGACACACAAGGGTGTAAATGAGATAGGGACCAATCATGTTTTTGCAACAGAGTCACTTATCAGGAATGCTTCTGATAGCAATGTTCAACATGTTGATGAGGTCAATTCTGCACGAGCAGCATCCGAGGATGATGTGGCAAAGAACATTGATGATCTTCTTGAGCGGTTTGATGCCACATCTGCAGAAGAACGTGAGTCCATATGTAGTGTGGTAAATGTGGTGAAAATCCATGCAAATACACTTGAGACGTTTAGAGAGGATCATGCTGGGCAAGCTGCTTCCATTGAACACAGGGCGTCCGAAACTTTTCAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGTATAGGGACTATGAGCCTAGTGGTACAACACCAATAAGATGTGAACCAGAGGTTCCAAGTAAAGGAGTTGAAACCATCACTTATTCCACGTTCTCCTCTCACGCAATTGAATTAATGGTGGTGTTGGCAACTTGCTCGGTTGGGTCTTCTATGGAATCAAATTTGTATCTTTATTTGTAA 3075 0.3909 MSGKEKGVNVQVLLRCRPFSEDELRSNAPQVVTCNDYNREVAVSQNIAGKHIDRVFTFDKVFGPSAQQRDLYDQAVIPIVNEVLEGFNCTIFAYGQTGTGKTYTMEGECKRSKSGPNGELPSGAGVIPRAVKQIFDTLEGQNAEYSVKVTFLELYNEEITDLLAPEELSKVSLEEKQKKQLPLMEDGKGGVLVRGLEEEIVTSANEIFTLLERGSSKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHRAKNIKNKPEINQKMMKSTLIKDLYGEIERLKAEVYATREKNGVYIPKERYHQEEIEKKAMADQIEQMGITIESYQKQLEDVKNNYVAQVRQCSDLSNKLDITETNLNKTGKLLANREEDLKKCRYTLNEKEFIISEQRKAENALAHQACVLRADLEKALQDNASLFVKIGRREDKLSSDNRAVVNNFQAELAQQVGSLCNTVATSLSEQNGHLQGVEKLCNSFLGIHDKAVIDLKDKVKDLRAVYVSHIEAVQNVVRLHTASSDATMEELSSAISSHGHSIEEFLATAATEVGSIFDELQSCLSTQQGELSLFAREVRNRFNLSVEQIKEISERSEELVEKLFVESKKLEDFVSQADQMQQESIDEFKKAYEEQSKSESEKLISDMTSLVSEHIRRQINLVDSKLVDLRDSGIKNKLFLDGHVSSVGDIVTNAKRKWQTFCIQAEKEAKDTADYSAAKHCRMEVLLQQSVNTAHLAFEHVKRTHKGVNEIGTNHVFATESLIRNASDSNVQHVDEVNSARAASEDDVAKNIDDLLERFDATSAEERESICSVVNVVKIHANTLETFREDHAGQAASIEHRASETFQXXXXXXXXXXXXXXXXXXXXXXXXXXEYRDYEPSGTTPIRCEPEVPSKGVETITYSTFSSHAIELMVVLATCSVGSSMESNLYLYL 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02623 1024 Gene3D Kinesin motor domain 5 397 IPR036961 -
Car03g02623 1024 CDD KISc_BimC_Eg5 7 365 - -
Car03g02623 1024 PANTHER KINESIN MOTOR DOMAIN-CONTAINING PROTEIN-RELATED 3 938 - -
Car03g02623 1024 Coils Coil 965 965 - -
Car03g02623 1024 ProSiteProfiles Kinesin motor domain profile. 9 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g02623 1024 Pfam Kinesin motor domain 15 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g02623 1024 SMART kinesin_4 7 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g02623 1024 ProSitePatterns Kinesin motor domain signature. 256 267 IPR019821 GO:0003777|GO:0005524|GO:0007018
Car03g02623 1024 PRINTS Kinesin heavy chain signature 86 107 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g02623 1024 PRINTS Kinesin heavy chain signature 223 240 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g02623 1024 PRINTS Kinesin heavy chain signature 257 275 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g02623 1024 PRINTS Kinesin heavy chain signature 306 327 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g02623 1024 PANTHER KINESIN-LIKE PROTEIN KIF11 3 938 - -
Car03g02623 1024 Coils Coil 416 443 - -
Car03g02623 1024 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 396 IPR027417 -
Car03g02623 1024 Coils Coil 372 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02623 Car-Chr3 72060796 72067148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02623 9 443 Miscellaneous Gene Families AT5G06670 34.199 7.16e-64 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02623 K10398 - gmx:100800246 1609.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02623 03 72060796 72067148 Car03g02623 03 72060796 72067148 ECH