Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02621 ATGAGCAGGTCAGGCCAGCCACCGGATTTGAAGAAATACATGGACAAACAGCTTCAGATCAAGCTGAATGCAAATCGCATGATTGTTGGTACTCTCCGAGGATTCGACCAGTTTATGAATTTGGTTGTTGACAATACTGTGGAGGTGAATGGCAATGACAAAACGGACATAGGGATGGTGGTAATCAGAGGAAATAGTGTGGTCACTGTAGAAGCACTTGAACCAGTGAACAGGACCTCCTGA 243 0.4527 MSRSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMVVIRGNSVVTVEALEPVNRTS 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02621 80 Gene3D - 1 78 - -
Car03g02621 80 Pfam LSM domain 9 71 IPR001163 -
Car03g02621 80 SMART Sm3 8 72 IPR001163 -
Car03g02621 80 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN G 1 79 - -
Car03g02621 80 SUPERFAMILY Sm-like ribonucleoproteins 8 76 IPR010920 -
Car03g02621 80 PIRSF Lsm7 5 79 - -
Car03g02621 80 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 1 79 IPR044641 -
Car03g02621 80 CDD Sm_G 6 74 IPR034098 GO:0000387|GO:0005681
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02621 Car-Chr3 72040830 72042554 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02621 K11099 - gmx:100305530 152.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02621 03 72040830 72042554 Car03g02621 03 72040830 72042554 ECH