Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02620 ATGACGGAAGTGCTTCAATTGCCTTCACCTTCAAGCTGTTCAACAAGTCCATGTGTTCGTCTCACACCCAATGATGTCTCACACCAAACAACTTCCCTTATTAACAACAATTCAACACTTCAACAACATTCCCAACAAGAAGCAGAAAAGGACCAACTTTCTATTTTGACTCTTTTGATTGCTACTTTTAGGAAATCTTTGATTGCTTGTAGCAGCACTGGTGCGGCTCTTCATACAAGAACTGTTCCTTCTTCTTCCATGGAAATTGGCTGGCCTTCTGATGTTAGACATGTTGCTCATGTTACCTTTGATCGTTTCCATGGTTTTCTTGGTTTGCCTGTTGAATTTGAACCTGAGGTTCCTAGGAGGCCTCCAAGTGCTAGCACAAGTGTTTTTGGTGTTTCAACAGAATCAATGCAGCTTTCTTTCGATGCCAGAGGAAACAGTGTACCTACAATACTGCTGTTAATGCAAAGACATCTGTATGCACAAGGAGGCCTGCAGGCTGAAGGAATCTTCAGAATTAATGCTGAAAATAGTCAAGAGGAGTTTGTGAGGGAACAATTGAACAGAGGAGTGGTACCAAATGGCATCGACGTGCACTGCTTGGCAGGTCTTATAAAGGCTTGGTTCAGAGAACTTCCAACCGGGATACTGGACCCTCTTTCGCCAGAGCAAGTAATGCAGTCCCAGTCAGAAGAAGAATGTGCTCAGCTTGTGAGGCTTCTTCCTCCAACAGAAGCTGCCCTCCTAGATTGGGCAGTAAACCTAATGGCAGATGTTGCTCAACTGGAACATTTGAACAAGATGAATGCGCGTAACATTGCAATGGTTTTTGCACCAAACATGACTCACATGGTAGATCCTTTGACTGCTCTGATGTACGCTGTACAAGTCATGAATTTCCTCAAGACTCTAGTGGTGATGACATTGAAAGAAAGAGAGGAGTCTATCACAAAATCGAATCCTGTTTCAAACCTAAATTCTTTTGATGACGATGGGCATCAGAGTGATTCACAGGTGCTTCTCAAGGATGGCAGTGAATATGGAAATGATTGTAGTGACGAGGACACAGATTTTGTCACTGCTGACCCTTCGCAACAAAGCCCTACACATCTTTTTAAAGATGGCAGTGAAACTGAAAGCGGATCCAAAAGTCTGCCAACGTCTATCGAAAATTTTATTTCAAGTGGTAACAGGTTGCTGGTTGATAGTTGTCCGTGCAATGTTGTCTCTCAAATTTGCTCTCTGGCAATTGGACTTCAAGACGAAGAAAATTCGTACTCCAAAAATATTTCTGCAAATGTCAGTTGCATCGTTGCCGATGTCGTAGTGGAGTCATTGCATAAGGTCTTTCTGGGAAGGGAAGGGATGACAAGGGTGTAA 1386 0.4307 MTEVLQLPSPSSCSTSPCVRLTPNDVSHQTTSLINNNSTLQQHSQQEAEKDQLSILTLLIATFRKSLIACSSTGAALHTRTVPSSSMEIGWPSDVRHVAHVTFDRFHGFLGLPVEFEPEVPRRPPSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENSQEEFVREQLNRGVVPNGIDVHCLAGLIKAWFRELPTGILDPLSPEQVMQSQSEEECAQLVRLLPPTEAALLDWAVNLMADVAQLEHLNKMNARNIAMVFAPNMTHMVDPLTALMYAVQVMNFLKTLVVMTLKEREESITKSNPVSNLNSFDDDGHQSDSQVLLKDGSEYGNDCSDEDTDFVTADPSQQSPTHLFKDGSETESGSKSLPTSIENFISSGNRLLVDSCPCNVVSQICSLAIGLQDEENSYSKNISANVSCIVADVVVESLHKVFLGREGMTRV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02620 461 MobiDBLite consensus disorder prediction 320 340 - -
Car03g02620 461 Gene3D CRIB domain 84 118 IPR036936 -
Car03g02620 461 ProSiteProfiles Rho GTPase-activating proteins domain profile. 134 319 IPR000198 GO:0007165
Car03g02620 461 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 1 425 - -
Car03g02620 461 CDD RhoGAP 151 306 - -
Car03g02620 461 Pfam RhoGAP domain 151 285 IPR000198 GO:0007165
Car03g02620 461 MobiDBLite consensus disorder prediction 354 387 - -
Car03g02620 461 CDD CRIB 87 127 - -
Car03g02620 461 MobiDBLite consensus disorder prediction 360 387 - -
Car03g02620 461 SUPERFAMILY GTPase activation domain, GAP 128 308 IPR008936 GO:0007165
Car03g02620 461 Gene3D Rho GTPase activation protein 122 321 IPR008936 GO:0007165
Car03g02620 461 SMART PBD_5 89 123 IPR000095 -
Car03g02620 461 MobiDBLite consensus disorder prediction 318 340 - -
Car03g02620 461 SMART RhoGAP_3 148 311 IPR000198 GO:0007165
Car03g02620 461 PANTHER MKIAA1688 PROTEIN 1 425 IPR044785 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02620 Car-Chr3 72031168 72034790 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02620 - - gmx:100783118 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02620 03 72031168 72034790 Car03g02620 03 72031168 72034790 ECH