Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02610 ATGAAGAAACATTTACTCAAaccaataccaaaacaaccaccatcaccaccaccaccaatcctcaacccaccgccaccaccaaaaccaAACACATCCCTTTTCCCTCCCACACTCTCTCCCACCCAACACTACAATCACTTCCTCCAATTCCTCAACACCCACCTCACCCATCCCCTCACCCCACAAACCCTCACTCACTTCCTCAAATCAAAACTCCATCACCACCCTTCATTCACCCACTTCGATTTCCATCTCTTCACATGGGCATCAACCCTCGACACTTTCTCTCACAACCACACTTCCTTCCAGTGGATGACACGTACCCTCGCTCTCTCTCATCGTTTCTCTCTCCTCCGTACCCTCCTCCATTTCATTTCCTCCAACCCTTGTAATTGCTCTCACGCCATTTTCTCTTGCCCTGAAACCGAACCCATTTTCTTGTTCGCAATTCAGGCTTATTGTAAAGCTTCCAAATTTGATGATGCCCTTTTCGCTTTTAACTGTATGCGTAGGTTAATCGATGGAAAGCCGCATGTTTCTGTATGTAATGTTTTGATTCATGGGTTTGTTAAATCTGGCAGGGTTGATAGAGCTTTTGAATTTTATAATGAGATGGTTAGAGATAgggttaagcctgatgtttttacttttaatattttgattagtgggtattgtaggaatttgaaatttggtcttgcattggagttgtttgatgaaatgaggaaaatggggtgtcatccaaatgttgttacttttaatactttgattaaggggttgtttaGGGAACGTCGGGTTGATGAAGGGATTGGGATGGTTTATGAGATGATTGAATTGGGGTGCCAACTTTCCGATGTCACTTGTGAGATTTTGGTTGAGGGGCTTTGCAAGGAAGGTAGGGTTTCGCAGGCGTGTGAGTTGTTAATGGAGTTTTCTAAGAGAGAGGTTTTGCCTAAAGGGTATGATTATTTTGTTTTGGTGCAAGTTTTGTGTGGGAAAGAAGATGTTTTGAAAGCTTTGGAGATTATTTATGAGCTATGGAGCAAAGGGTGTGTTCCTAGCTTGATTGCTTGTATTGTGATGATTGATGGTTTGAGAGGATTGGGGAAGATTGAAGAGGCAATGAGATTGGTGGAAAAAATGCTTAAAGATGAGGGTATGGTACTTGATGTTGTGACTTTCAATTCTGTTCTTCAAGATGTTTGCAATGCGGGAAGGACAGAAGAAGCAAATAGATTAAGATTACTTGCTTTGAGCAAGGGTTTGGAACCCGACGGCATGACTTATAAAATTCTGGTTACTGGGTATGCAGGAGAGCGAAATCGAACAGAAGGAGAGTTGGTGGTAAATGAAATGTTGGATAGGGGGTTCATACCTGATCTTGCTTCATATAATAGACTGATGGATGGACTATCTAATTGTCAACACGGCAGGCGTTATCGTGTGAACAAAATTGGCAGCTGA 1461 0.3641 MKKHLLKPIPKQPPSPPPPILNPPPPPKPNTSLFPPTLSPTQHYNHFLQFLNTHLTHPLTPQTLTHFLKSKLHHHPSFTHFDFHLFTWASTLDTFSHNHTSFQWMTRTLALSHRFSLLRTLLHFISSNPCNCSHAIFSCPETEPIFLFAIQAYCKASKFDDALFAFNCMRRLIDGKPHVSVCNVLIHGFVKSGRVDRAFEFYNEMVRDRVKPDVFTFNILISGYCRNLKFGLALELFDEMRKMGCHPNVVTFNTLIKGLFRERRVDEGIGMVYEMIELGCQLSDVTCEILVEGLCKEGRVSQACELLMEFSKREVLPKGYDYFVLVQVLCGKEDVLKALEIIYELWSKGCVPSLIACIVMIDGLRGLGKIEEAMRLVEKMLKDEGMVLDVVTFNSVLQDVCNAGRTEEANRLRLLALSKGLEPDGMTYKILVTGYAGERNRTEGELVVNEMLDRGFIPDLASYNRLMDGLSNCQHGRRYRVNKIGS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02610 486 MobiDBLite consensus disorder prediction 1 35 - -
Car03g02610 486 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 178 212 IPR002885 -
Car03g02610 486 Pfam PPR repeat 279 307 IPR002885 -
Car03g02610 486 PANTHER FERTILITY RESTORER HOMOLOGUE A-LIKE 3 474 - -
Car03g02610 486 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 283 317 IPR002885 -
Car03g02610 486 Pfam PPR repeat family 212 259 IPR002885 -
Car03g02610 486 Pfam PPR repeat family 389 436 IPR002885 -
Car03g02610 486 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 248 282 IPR002885 -
Car03g02610 486 TIGRFAM PPR: pentatricopeptide repeat domain 215 249 IPR002885 -
Car03g02610 486 TIGRFAM PPR: pentatricopeptide repeat domain 250 283 IPR002885 -
Car03g02610 486 TIGRFAM PPR: pentatricopeptide repeat domain 427 459 IPR002885 -
Car03g02610 486 TIGRFAM PPR: pentatricopeptide repeat domain 181 214 IPR002885 -
Car03g02610 486 TIGRFAM PPR: pentatricopeptide repeat domain 357 389 IPR002885 -
Car03g02610 486 TIGRFAM PPR: pentatricopeptide repeat domain 285 317 IPR002885 -
Car03g02610 486 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 424 458 IPR002885 -
Car03g02610 486 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 213 247 IPR002885 -
Car03g02610 486 Pfam PPR repeat 181 209 IPR002885 -
Car03g02610 486 Pfam PPR repeat 359 383 IPR002885 -
Car03g02610 486 Pfam PPR repeat 150 171 IPR002885 -
Car03g02610 486 MobiDBLite consensus disorder prediction 9 34 - -
Car03g02610 486 PANTHER ATPASE EXPRESSION PROTEIN 3 3 474 - -
Car03g02610 486 Gene3D Tetratricopeptide repeat domain 242 312 IPR011990 GO:0005515
Car03g02610 486 Gene3D Tetratricopeptide repeat domain 313 380 IPR011990 GO:0005515
Car03g02610 486 Gene3D Tetratricopeptide repeat domain 48 241 IPR011990 GO:0005515
Car03g02610 486 Gene3D Tetratricopeptide repeat domain 381 483 IPR011990 GO:0005515
Car03g02610 486 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 389 423 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02610 181 484 Glycosyltransferase AT1G05670 24.262 2.47e-22 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02610 - - aprc:113860936 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02610 03 71970015 71973344 Car03g02610 03 71970015 71973344 ECH