Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02598 ATGGGAATCAAGGGCCAGATTCTCTTGGTTTTGGTAATAATCGGATGGTTAGGATTTGACGCCGTTCATTGCTACAATCGACCACCGCCTGGTAAAAACATCGCTGTTCCTCACGTTGGCGATGATGCTACGCCACAACAGGTACATATATCTCAAGTGGGGCAAGACAAGATGAGAATATCATGGATTACACATGAGCCAACATCTGCAACAGTGGAATACGGCCCATCTCCTTCAGCAAACGCGTTTTCTGCCAATGGGGAAACCACTTTTTACAATTATGTTACTTACCTATCTGGTCATATTCACAACGTTGTGATTGGGCCACTCAAGCCCAACACGGTCTACTACTACCGTTTGGGTGAATCAGACAAAACATACAATTTAAAGACTACACCCTCTCAATTTCCAATCAAGTTTGCAGTAGTTGGAGATCTTGGTCAAACAGAGTGGACAGTTTCAACATTACAACATATAAAAGACTCAAACTATGATATGCTATTATTACCAGGAGATTTGTCCTACGCAGACGTGATACAACCTCTATGGGACTCTTTTGGTCGTTTGGTTGAACCATTAGCAAGCGAACGTCCATGGATGGTGACCACAGGGAACCATGATGTTGAGAAAATTCCAATCATCCATAGAACTCCATTCACAGCTTACAATGCAAGGTGGAAAATGCCTTTCCAAGAGAGTGGATCAGACTCTAACCTTTACTATTCTTTTGATGTGTCTGGTGTTCATGTCATCATGTTGGGATCTTACACCGATTTCGATTCTGACTCGGCTCAATATCAATGGCTTAAAGGGGACTTGGAGAATATAAACAGAGGAAAAACTCCTTGGGTATTTGTGTTGGTTCATGCTCCATGGTATAACTCTAATGAAGCTCATCAGGGTGAACGTGAGTCTGTTGGTATGAAGGCTTCTATGGAAGATTTGCTCTATCAAGCTCGCGTTGATGTTATTTTTGCAGGACATGTTCATGCATACGAACGCTTTAAACGTGTTTATAACGACGAAAGTGATGATTGTGCTCCCATTTATATTAACATTGGGGATGGTGGCAATCGTGAAGGCCTCGCCAAAAAGTACCAAGATCCCCAGCCAGATATATCAATGTTTAGGGAAGCTAGCTTTGGACATGGAACAATAGATGTGGTCAATGCATCACATGCACTTTGGAGTTGGCATAAGAATGATAATGAGGAACGAGTTGCTAGTGACACTGTTTGGCTAACAAGCCTCTCCTCTAATCATGCTTGTATAGCATGA 1278 0.4233 MGIKGQILLVLVIIGWLGFDAVHCYNRPPPGKNIAVPHVGDDATPQQVHISQVGQDKMRISWITHEPTSATVEYGPSPSANAFSANGETTFYNYVTYLSGHIHNVVIGPLKPNTVYYYRLGESDKTYNLKTTPSQFPIKFAVVGDLGQTEWTVSTLQHIKDSNYDMLLLPGDLSYADVIQPLWDSFGRLVEPLASERPWMVTTGNHDVEKIPIIHRTPFTAYNARWKMPFQESGSDSNLYYSFDVSGVHVIMLGSYTDFDSDSAQYQWLKGDLENINRGKTPWVFVLVHAPWYNSNEAHQGERESVGMKASMEDLLYQARVDVIFAGHVHAYERFKRVYNDESDDCAPIYINIGDGGNREGLAKKYQDPQPDISMFREASFGHGTIDVVNASHALWSWHKNDNEERVASDTVWLTSLSSNHACIA 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02598 425 CDD MPP_PAPs 134 416 IPR041792 -
Car03g02598 425 SUPERFAMILY Metallo-dependent phosphatases 137 405 IPR029052 -
Car03g02598 425 Pfam Calcineurin-like phosphoesterase 139 332 IPR004843 GO:0016787
Car03g02598 425 Gene3D - 44 134 - -
Car03g02598 425 SUPERFAMILY Purple acid phosphatase, N-terminal domain 36 133 IPR008963 GO:0003993|GO:0046872
Car03g02598 425 Pfam Purple acid Phosphatase, N-terminal domain 45 127 IPR015914 GO:0003993|GO:0046872
Car03g02598 425 PANTHER PURPLE ACID PHOSPHATASE 11 423 - -
Car03g02598 425 Pfam Iron/zinc purple acid phosphatase-like protein C 347 404 IPR025733 -
Car03g02598 425 Gene3D - 135 422 IPR029052 -
Car03g02598 425 PANTHER ACID PHOSPHATASE RELATED 11 423 IPR039331 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02598 Car-Chr3 71872394 71877463 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02598 45 383 Miscellaneous Gene Families AT2G03450 25.735 1.91e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02598 K22390 - gmx:100794764 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02598 03 71872394 71877463 Car03g02598 03 71872394 71877463 ECH