Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02586 ATGGCTTCGGTATTGGCGGGAGATGACGTGGCAATATCGACTAGTAGTCGTCGGAGTTGGACATCAACTAGTTTCAGGGATGTTTGGACGGCGACCACGGCTGCTGTGCCGGATGTGTTCGAACGGAGTGATCGGCACACACAAGAGGATGACGAGTACCACCTCACTTGGGCAGCCATTGAACGTTTGCCTACTTTTGAGCGCATGAGAAAAGGTGTAATGAAGCATGTTGGTGAAAATGGAAAAGTTGTGCATGATGAAGTTGATGTTGCTAAACTTGGTTTACATGACAAGAAAATTTTGATGGAGACCATCCTTAAGTTTGTCGAAGAAGACAATGATAAGTTTCTCCGAAAACTTAGAGATAGACAAGACAGGGTGGGGATTGAAATTCCAAAACTTGAAGTCCGTTACAAGAAATTATGTGTGGAGGGAGATGTGTATGCTGGAAGTAGAGCGCTTCCTACTTTACTTAATGTTACCATCAACACTTTAGAGAGTATTTTGGGATTGTTTCACCTTGCACCGTCCAAGAAGAGGGAGATTCATATTCTCAAAGATGTTAGTGGAATTGTAAAACCATCAAGgatgacactccttcttggtcctccaagttctgggaaaacaacattacttctagcacttgcaggaaaacttgatcatgatttaagggcttcagggaaaatcacatactgtggtcatgaactaaatgaatttgttgttacaaaaacctgtgcatatattagtcaacatgatattcaccatggagaaattacagtgagagagacattagatttttcatcacgttgtctaggtgttggtacaagatatgaaatgttgatggaactctctagaagggagagagaagctggaattaaaccagaccctgagattgatgcattcatgaaagctatagcattgtcgggccaaaaaacaagtttggtaacagattatgttctcaagatgcttggattggatatatgtgccgacacaatggttggtaatgaaatgagaaggggtatctctggaggtcaaaagaagcgagtcacaacaggggagatgttggtaggaccggcaaaagcactctttatggacgaaatatcaacaggattggatagtacaaccacttttcaaatatgcaagttcatgagacaaatggttcatataatggatgtaacagtggtcatttctctcttacaaccagcaccagagacatttgaactctttgacaatattatcctactttcagaaggtcaaattgtataccaaggtccacgtgagagtgtgctagagttctttgaaaacatgggatttaaatgtccagatagaaaaggtgttgctgatttcttacaagaagtaacatccatgaaagaccagcaacaatattggtttagaaaagatgaaccttatagatatgtttcagtttctgaatttgtagattcctttaattcatttcttattggagaccaacttgtgacagagcttaaagttccttatgataagagtcaaacccacccagctgcattagtcaaagaaaaatacggtatttcaaattgggaactatttaaggcatgtttttcaaaagaatggcttcttatgaagaggaattcttttgtttatgtattcaaaacaacacagataacaatcatgtctattattacttttactgtgttctttagaacaaaaatgacagttggcactgttcaggatggacaaaagtttcatggggcattattctttacactgataaatatgatgtttaatgggatggcagaactatccatgactgttactaggcttcctgtgttttacaaacaaagggattttatgttctaccctgcatgggcatttgggctacctatatggattcttaggatccctctctcctttttggaatcagggatatggattgtccttacatattatacaattgggtttgctccttctcctactagattttttcgacaattcttggcattgtttggcattcatcaaatggctctctctttatttcgatttgttgctgcacttggtagaacattagttgttgctaattcgttaggtaccttgaccttgctagtggtatttgtgctaggaggtttcattgttgctaaagatgacattaaaccatggatgatatggggctactatatatctcctataatgtatggccaaaatgccattgcaattaatgaattcttagacaaacgatggagtaaaccaaatacagatctaagaattaatgaaccaacaattggaaaagtacttctcaaagctagaggcttgtatacagaagactactggtattggatctgcattggagccttggttgggttttctcttctcttcaacatatttttcattgttgcattgacatacttaaatcCTTTAAGTGATTCAAAAGCAGTCACAACCGATGAAGGTGGCAAGAAAAATGAAAATTCATCCTTAAGACACCATGCCTTTCAAGGTACCGACATAGCAATGAAAAATTCTTCAGAAATTACTAGTTCGTCGAACCATGAACCGCGACgaggaatggttctaccatttcaacctctttcaatggcgttcaatcatattaactactacgttgacatgccagcagaaatgaagagtcaaggaatcaataaggataaacttcaactactacaaaatgttagtggtgtttttagaccaggaatattaacagcacttgtaggtgttagtggtgctgggaagacaaccctcatggatgtattagctggaagaaaaacaggtggatacattgaaggaaatattagcatatcaggttaccaaaagaaccaaacaacattcgctcgaattagcggttactgcgaacagaatgacattcattctccacatgttacggtctatgaatcactattattttcggcatggcttcgtcttccttcagatgtaaagacagaaacaagaaagatgtttgttgaagaagttatggatttggtagagcttaaatcacttagagatgctcttgtgggacttccaggtgtagatggtctatcaacagaacaaaggaaaaggcttactattgcagtagagcttgttgccaacccttcaatcatcttcatggatgaaccaacctcaggccttgatgctagagctgctgctatcgttatgcgaaccgtgagaaacacagtagacacagggagaactgttgtgtgcacaattcatcaaccaagcatagacatttttgaagcttttgatgagttattgttgatgaaaagaggagggcaagttatctatggcggacctctcggtcgccactcacataagcttgtagaatattttgaagctatccaaggggttcaaaagattaaagatggttataatccagccacatggatgcttgagattagctctccatcaaatgagactcaattagatgtagattttgcagagatttatgctaactctacactttatcagagaaatcaagaacttattaaggagctccatactccagcaccagattcgaaggacttgtacttcccaacaaaatattcacaatcattttttgttcaatgcaaagctaacttctggaaacaacatttgtcctattggagacattctcaatataatgttgttagattcttcatgaccacagtcattggattattgtttggtctaatattttggaagcaagccaaaaagacGAAAACACAACAAGAATTACTGAATCTTTTGGGAGCCATGTATTCGACTGTTCTTTTTCTTGGCGCAACAAATGCTTCAGCAGTGCAACCAGTTGTTTCCATTCATTACCCTATGCATTTGCTCAGgtggcagttgaggcaatttataatgcaattcaaacaatga 3843 0.0945 MASVLAGDDVAISTSSRRSWTSTSFRDVWTATTAAVPDVFERSDRHTQEDDEYHLTWAAIERLPTFERMRKGVMKHVGENGKVVHDEVDVAKLGLHDKKILMETILKFVEEDNDKFLRKLRDRQDRVGIEIPKLEVRYKKLCVEGDVYAGSRALPTLLNVTINTLESILGLFHLAPSKKREIHILKDVSGIVKPSRMTLLLGPPSSGKTTLLLALAGKLDHDLRASGKITYCGHELNEFVVTKTCAYISQHDIHHGEITVRETLDFSSRCLGVGTRYEMLMELSRREREAGIKPDPEIDAFMKAIALSGQKTSLVTDYVLKMLGLDICADTMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSTTTFQICKFMRQMVHIMDVTVVISLLQPAPETFELFDNIILLSEGQIVYQGPRESVLEFFENMGFKCPDRKGVADFLQEVTSMKDQQQYWFRKDEPYRYVSVSEFVDSFNSFLIGDQLVTELKVPYDKSQTHPAALVKEKYGISNWELFKACFSKEWLLMKRNSFVYVFKTTQITIMSIITFTVFFRTKMTVGTVQDGQKFHGALFFTLINMMFNGMAELSMTVTRLPVFYKQRDFMFYPAWAFGLPIWILRIPLSFLESGIWIVLTYYTIGFAPSPTRFFRQFLALFGIHQMALSLFRFVAALGRTLVVANSLGTLTLLVVFVLGGFIVAKDDIKPWMIWGYYISPIMYGQNAIAINEFLDKRWSKPNTDLRINEPTIGKVLLKARGLYTEDYWYWICIGALVGFSLLFNIFFIVALTYLNPLSDSKAVTTDEGGKKNENSSLRHHAFQGTDIAMKNSSEITSSSNHEPRRGMVLPFQPLSMAFNHINYYVDMPAEMKSQGINKDKLQLLQNVSGVFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGNISISGYQKNQTTFARISGYCEQNDIHSPHVTVYESLLFSAWLRLPSDVKTETRKMFVEEVMDLVELKSLRDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYGGPLGRHSHKLVEYFEAIQGVQKIKDGYNPATWMLEISSPSNETQLDVDFAEIYANSTLYQRNQELIKELHTPAPDSKDLYFPTKYSQSFFVQCKANFWKQHLSYWRHSQYNVVRFFMTTVIGLLFGLIFWKQAKKTKTQQELLNLLGAMYSTVLFLGATNASAVQPVVSIHYPMHLLRWQLRQFIMQFKQ 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02586 1280 PANTHER ATP-BINDING CASSETTE TRANSPORTER 20 1261 - -
Car03g02586 1280 SMART AAA_5 893 1085 IPR003593 -
Car03g02586 1280 SMART AAA_5 194 426 IPR003593 -
Car03g02586 1280 Pfam ABC-transporter N-terminal 110 160 IPR029481 -
Car03g02586 1280 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 169 442 IPR003439 GO:0005524
Car03g02586 1280 Pfam ABC transporter 884 1036 IPR003439 GO:0005524
Car03g02586 1280 Pfam ABC transporter 185 367 IPR003439 GO:0005524
Car03g02586 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 879 1092 IPR027417 -
Car03g02586 1280 Pfam ABC-2 type transporter 400 453 IPR043926 GO:0140359
Car03g02586 1280 Pfam ABC-2 type transporter 1065 1126 IPR043926 GO:0140359
Car03g02586 1280 Pfam ABC-2 type transporter 521 733 IPR013525 GO:0016020|GO:0140359
Car03g02586 1280 Pfam ABC-2 type transporter 1182 1260 IPR013525 GO:0016020|GO:0140359
Car03g02586 1280 CDD ABCG_PDR_domain2 853 1091 IPR034003 -
Car03g02586 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 442 IPR027417 -
Car03g02586 1280 CDD ABCG_PDR_domain1 174 424 IPR034001 -
Car03g02586 1280 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 865 1108 IPR003439 GO:0005524
Car03g02586 1280 Pfam Plant PDR ABC transporter associated 738 803 IPR013581 -
Car03g02586 1280 Gene3D - 172 475 IPR027417 -
Car03g02586 1280 Gene3D - 870 1105 IPR027417 -
Car03g02586 1280 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 20 1261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02586 Car-Chr3 71755016 71764563 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02586 K08711 - gmx:100786482 2091.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02586 03 71755016 71764563 Car03g02586 03 71755016 71764563 ECH