Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02585 ATGGTTTACACCATCTCAGGAATTCGATTTCCCGTTGTTCCTTCACTGCACAAATCAAGCTTACGTGGCGATCGCAGGACTTCATCTTACTCACTTTTTCTCAAGAAGAGTAACTCATTCTCTCGTACATCACTTTATGCAAAATTTTCTCATGATTCTGAATCCAAATCTTCCACAATTGCTGAATCTGATAAAGTACTTATTCCTGAAGATCAAGATATCTCTGCATCCGTGAAGGATCAACTTGAAACTCCTGAAATAATCTCAGAGGATGCGCAGAAGTTGGAGGATTTAACCATGAAAGATGAGAATAAGTACAATCTTGATGAAGCAGCTAGCAGTTATAGAGAAGTTGGGGATGGGCAAGGTTCTGTTATGTCATCATCACCTGTAGACGTTAACACCAATGCTCAAGCCAATAAGACATCAGTTCATTCAGGCGAGAAAGTTAAAATACTAAGTGATGAAGATAAACCTAAGATCATTCCTCCACCTGGTACTGGGCAGAAAATATATGAGATTGATTCATTTTTGAAAGCTCACAGTCAGCATCTTGATTTCCGTTATGGACAGTACAAAAGAATTCGTGAGGAAATTGACAAGTATGAAGGTGGTCTTGATGCATTTTCTCGTGGGTACGAAAAGTTAGGCTTCACGCGCAGTGCTACAGGCATTACTTACAGAGAGTGGGCACCTGGAGCTAAGGATGATTTTGGTGTGTGGGAGATTTTCTTGCCAAACAACGCCGATGGTTCACCACCAATTCCTCATGGGTCTCGAGTCAAGATCCACATGAATACTCCCTCTGGGATCAAGGACTCAATTCCTGCTTGGATCAAATTCTCTGTACAGGCTCCAGGTGAAATTCCATATAATGGAATATACTATGATCCCCCAGAGGAGGAAAAATATGTCTTCAAACATCCACAGCCAAAGAGACCACAATCAATTAGAATATACGAGTCACATGTTGGAATGAGTAGCCCGGAACCAAAAATTAACACATATGCCAATTTTAGAGATGATGTACTACCTCGCATTAAAAAGCTTGGTTATAATGCTGTCCAAATTATGGCTATCCAAGAACATTCTTACTATGCTAGCTTTGGGTACCATGTTACTAATTTCTTTGCACCTAGCAGTCGGTTCGGAACACCAGAAGATCTTAAGTCTCTGATAGACAGAGCCCACGAACTAGGTCTGCTTGTTCTGATGGATATAGTACATAGCCATGCATCAAATAATACATTGGATGGCCTGAACATGTTTGATGGAACTGATGGTCATTACTTCCATCCTGGGTCACGGGGTTATCATTGGATGTGGGATTCTCGCCTTTTTAACTATGGAAGCTGGGAAGTTCTAAGGTATCTACTTTCAAATGCAAGATGGTGGCTGGATGAATATAAGTTTGATGGGTTTCGATTTGATGGTGTCACATCAATGATGTACACTCATCATGGGCTGCAGGTATCTTTTACTGGAAACTACAACGAGTATTTTGGTTTTGCAACTGATGTTGATGCTGTGGTTTACCTGATGCTGGTAAACGATCTCATTCATGGGCTCTTCCCTGAGGCTGTTACAATTGGTGAAGATGTGAGTGGAATGCCAACATTCTGTGTTCCGACGCAAGATGGTGGGATTGGCTTTAACTATCGCTTGCATATGGCCATTGCAGACAAGTGGATTGAGCTTCTCAAGAAAAAAGATGAAGACTGGAGAATGGGTGATATAGTCCACACACTAACAAACAGAAGATGGCTGGAAAAATGTGTGGCTTATGCTGAAAGTCATGACCAAGCCTTGGTTGGTGACAAGACACTAGCATTTTGGTTGATGGACAAGGATATGTATGACTTCATGGCTTTAGACAGACCATCTACTCCTCTAATAGATCGTGGTATTGCATTACACAAAATGATTAGGCTTATTACTATGGGCCTTGGTGGTGAAGGGTATTTGAATTTTATGGGAAATGAATTCGGCCATCCTGAGTGGATTGATTTTCCAAGGGGTGAGCAACATCTTCCTAATGGCGTAGTAGTTCCCGGGAATAACAACAGTTTTGATAAATGTAGACGTAGATTTGACTTGGGGGATGCAGAATATCTAAGATATCATGGAATGCAAGAATTTGATCAAGCTATGCAGCATCTAGAAGAAAGTTATGGTTTCATGACTTCTGAGCACCAATATATTTCACGGAAAAATGAAGGTGATAAAGTTATAATCTTCGAAAGGGACAACCTGGTCTTTGTATTCAATTTTCATTGGACCAACAGTTATTCAGATTACCGAGTTGGCTGTTTAATGCCAGGGAAATATAAGATTGTCTTGGATTCAGATGATGCCTTGTTTGGTGGCTTCAATAGGATCAATCATACTGCTGAGTACTTCACCTCTGAAGGATGGTATGATGACCGGCCTCGATCTTTCCTCGTGTATGCACCTTGTAGAACAGCAGTGGTTTATGCCCTTGTAGATGGAGTTGATTCAGAGCCCGTTGAACAGTCagttgaagttgaacagccagttgaagttgaacagccagttgaaattgaacagtcagtcgaagttgaaCCCTGA 2589 0.4013 MVYTISGIRFPVVPSLHKSSLRGDRRTSSYSLFLKKSNSFSRTSLYAKFSHDSESKSSTIAESDKVLIPEDQDISASVKDQLETPEIISEDAQKLEDLTMKDENKYNLDEAASSYREVGDGQGSVMSSSPVDVNTNAQANKTSVHSGEKVKILSDEDKPKIIPPPGTGQKIYEIDSFLKAHSQHLDFRYGQYKRIREEIDKYEGGLDAFSRGYEKLGFTRSATGITYREWAPGAKDDFGVWEIFLPNNADGSPPIPHGSRVKIHMNTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFKHPQPKRPQSIRIYESHVGMSSPEPKINTYANFRDDVLPRIKKLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPEDLKSLIDRAHELGLLVLMDIVHSHASNNTLDGLNMFDGTDGHYFHPGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLDEYKFDGFRFDGVTSMMYTHHGLQVSFTGNYNEYFGFATDVDAVVYLMLVNDLIHGLFPEAVTIGEDVSGMPTFCVPTQDGGIGFNYRLHMAIADKWIELLKKKDEDWRMGDIVHTLTNRRWLEKCVAYAESHDQALVGDKTLAFWLMDKDMYDFMALDRPSTPLIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGEQHLPNGVVVPGNNNSFDKCRRRFDLGDAEYLRYHGMQEFDQAMQHLEESYGFMTSEHQYISRKNEGDKVIIFERDNLVFVFNFHWTNSYSDYRVGCLMPGKYKIVLDSDDALFGGFNRINHTAEYFTSEGWYDDRPRSFLVYAPCRTAVVYALVDGVDSEPVEQSVEVEQPVEVEQPVEIEQSVEVEP 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02585 862 Gene3D Immunoglobulins 235 303 IPR013783 -
Car03g02585 862 Pfam Alpha amylase, C-terminal all-beta domain 733 827 IPR006048 GO:0003824|GO:0005975|GO:0043169
Car03g02585 862 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 2-1, CHLOROPLASTIC/AMYLOPLASTIC 18 833 - -
Car03g02585 862 SUPERFAMILY (Trans)glycosidases 307 724 IPR017853 -
Car03g02585 862 Pfam Alpha amylase, catalytic domain 344 415 IPR006047 GO:0005975
Car03g02585 862 PIRSF GlgB 121 237 IPR037439 GO:0003844|GO:0005978
Car03g02585 862 PIRSF GlgB 234 836 IPR037439 GO:0003844|GO:0005978
Car03g02585 862 SMART aamy 334 694 IPR006047 GO:0005975
Car03g02585 862 Gene3D Glycosidases 304 724 - -
Car03g02585 862 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 18 833 IPR037439 GO:0003844|GO:0005978
Car03g02585 862 SUPERFAMILY Glycosyl hydrolase domain 729 828 - -
Car03g02585 862 CDD AmyAc_bac_euk_BE 300 715 - -
Car03g02585 862 Gene3D - 729 834 IPR013780 -
Car03g02585 862 SUPERFAMILY E set domains 209 298 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02585 Car-Chr3 71708951 71731732 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02585 1 821 Glycoside Hydrolase AT2G36390 71.901 0.0 1253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02585 K00700 - gmx:100785968 1505.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02585 03 71708951 71731732 Car03g02585 03 71708951 71731732 ECH