Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02578 ATGAGAGGCATAACATCTTGTTACAATGAACATGCCATTAGAGTATCTGATTTATATTGTTCAAGACCTTCCAATTCAAACCATTCTTCTTATCTTTCTCCAAAACTCAACAATAATAACCCTTCAACTCAAAATTCAGTTACCTGCATCTACAAACTCAACTTCATTTCAATTAAAAAAACACAATTTTTCATCACACTAACTTGGACAAAGAAACTCATAGGTCAAGGTTTCATCATAAACATCATCAACCACAACActgattctgattctgattatgttaatgttctgTCAAAGTTCAATACTAATCCTCCTCTGCTATTGAGAAAGAACAAAGGCACTGAAACGTTTCAAAATCAAAACTTTGAAGTTAAAGTCTTGTGGGATCTTTCTGATGCTAAGTATGATGAAGGGCCTGAACCGGTTACCGGGTTTTACGTATATGTTTTGGTGAACTCTGAATTGGGTCTTTTTCTCGGAGACAAAAATGAAGAAACTTTGAACTTAAATGAGAAACAAATTCATGGAGCGAAATTCTCCATGGTTTCGAGGAGCGAACGGTTCAATGGCACCGGTATTTATCCAACAAAGGTTAAGTTTTCTGAAACAGGAATTGTTCATGATTTATTGATAAAGTTTGGTGTTGAAGAAGAAGGATCAAAGAGCCATGTTTTGTGTTTGTTTATGGATAAGAAAATGGTGTTTCAAGTGAAGAGATTGAAGTGGAATTTTCGTGGGAATCAAACAATTTTTGTGGACGGTTTGGTTGTGGATATGATGTGGGATGTGCATGATTGGATTTTCAATCCTAATTCTGGTTCTGCTGTTTTTATGTTTAGGACAAGAAGTGGATTGGATAGTAGATTATGGTTGGAAGAGAAGAATTTGTTTAAACAAAATGAACATGATAGAATTGGGTTTTCTTTGTTGATACGTGGATGTAAGAACCCTCATTGA 957 0.3386 MRGITSCYNEHAIRVSDLYCSRPSNSNHSSYLSPKLNNNNPSTQNSVTCIYKLNFISIKKTQFFITLTWTKKLIGQGFIINIINHNTDSDSDYVNVLSKFNTNPPLLLRKNKGTETFQNQNFEVKVLWDLSDAKYDEGPEPVTGFYVYVLVNSELGLFLGDKNEETLNLNEKQIHGAKFSMVSRSERFNGTGIYPTKVKFSETGIVHDLLIKFGVEEEGSKSHVLCLFMDKKMVFQVKRLKWNFRGNQTIFVDGLVVDMMWDVHDWIFNPNSGSAVFMFRTRSGLDSRLWLEEKNLFKQNEHDRIGFSLLIRGCKNPH 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02578 318 PANTHER EXPRESSED PROTEIN 1 316 IPR008586 -
Car03g02578 318 PANTHER FAMILY PROTEIN, PUTATIVE (DUF868)-RELATED 1 316 - -
Car03g02578 318 Pfam Plant protein of unknown function (DUF868) 42 314 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02578 Car-Chr3 71616758 71617714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02578 1 316 EF-hand Containing Proteins AT5G28150 33.123 2.30e-51 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02578 - - pvu:PHAVU_001G186900g 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02578 03 71616758 71617714 Car03g02578 03 71616758 71617714 ECH